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Eggerthella lenta DSM 2243 (elen0)
Gene : ACV55142.1
DDBJ      :             transcriptional regulator, XRE family
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  38/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.118.18a.35.1
:372 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   14->70 1utxA PDBj 5e-05 31.6 %
:RPS:PDB   1->67 3clcB PDBj 1e-11 16.4 %
:RPS:SCOP  6->70 1y9qA1  a.35.1.8 * 1e-11 24.6 %
:HMM:SCOP  1->70 2bnmA1 a.35.1.3 * 3.4e-14 32.9 %
:HMM:SCOP  89->214 1ouvA_ a.118.18.1 * 0.00091 18.4 %
:RPS:PFM   14->64 PF01381 * HTH_3 1e-04 37.3 %
:HMM:PFM   11->64 PF01381 * HTH_3 1.6e-12 33.3 54/55  
:HMM:PFM   116->152 PF03259 * Robl_LC7 0.00088 36.1 36/91  
:BLT:SWISS 20->64 XRE_BACSU 9e-06 44.4 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACV55142.1 GT:GENE ACV55142.1 GT:PRODUCT transcriptional regulator, XRE family GT:DATABASE GIB01015CH01 GT:ORG elen0 GB:ACCESSION GIB01015CH01 GB:LOCATION 1407447..1408565 GB:FROM 1407447 GB:TO 1408565 GB:DIRECTION + GB:PRODUCT transcriptional regulator, XRE family GB:NOTE PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: bcz:BCZK3019 DNA-binding protein; transcriptional regulator GB:PROTEIN_ID ACV55142.1 GB:DB_XREF GI:257474822 InterPro:IPR001387 LENGTH 372 SQ:AASEQ MDDINLGAAIARERRAAQVTQGELAAHLGVTKAAVSKWELEQSMPDLALLPRIAAYFDLTLDELFDYRPQLVGDNLQGAYLRLLAQFDEDPEAAFANAEDLVRSHYSCWPALQQMGMLYAQRATLDPDRAEPLAARAAELFERVERHADDVELVRAARMMRASVMSVQGDLDGCIALFESLKPDRTTANIDLMLASMYQQRGDLDAGLKLFQESMGWCVMNAISCVSAQIPLYADDAEHLEALLRAGEGVLSGFDLQNQSPMTVLTFCTNASSACLQAGDEDRAASYLERFTSLLEELDARMLVYGRNQSALYDRAPELWSVDPGQEHIAETRFGAIDFRRQCAQMVAAQPVWAERAGDSRFKPLFDRLEAL GT:EXON 1|1-372:0| BL:SWS:NREP 1 BL:SWS:REP 20->64|XRE_BACSU|9e-06|44.4|45/113| SEG 126->140|dpdraeplaaraael| BL:PDB:NREP 1 BL:PDB:REP 14->70|1utxA|5e-05|31.6|57/66| RP:PDB:NREP 1 RP:PDB:REP 1->67|3clcB|1e-11|16.4|67/77| RP:PFM:NREP 1 RP:PFM:REP 14->64|PF01381|1e-04|37.3|51/55|HTH_3| HM:PFM:NREP 2 HM:PFM:REP 11->64|PF01381|1.6e-12|33.3|54/55|HTH_3| HM:PFM:REP 116->152|PF03259|0.00088|36.1|36/91|Robl_LC7| GO:PFM:NREP 1 GO:PFM GO:0043565|"GO:sequence-specific DNA binding"|PF01381|IPR001387| RP:SCP:NREP 1 RP:SCP:REP 6->70|1y9qA1|1e-11|24.6|65/79|a.35.1.8| HM:SCP:REP 1->70|2bnmA1|3.4e-14|32.9|70/0|a.35.1.3|1/1|lambda repressor-like DNA-binding domains| HM:SCP:REP 89->214|1ouvA_|0.00091|18.4|114/0|a.118.18.1|1/1|HCP-like| OP:NHOMO 54 OP:NHOMOORG 38 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------11----------------------------------------------------------------------------------------------------------------11111-11--111-1------111---------------------------------------11---------12---------1-----------------------------------------------22222222-2--222----1-1-------321---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 86 STR:RPRED 23.1 SQ:SECSTR HHHHHHHHHHHHHHHHTTccHHHHHHHTTccHHHHHHHHTTcccccHHHHHHHHHHTTccHHHHHHHccTHHcccccHHHHHHHHH############################################################################################################################################################################################################################################################################################## DISOP:02AL 372-373| PSIPRED cccccHHHHHHHHHHHccccHHHHHHHHcccHHHHHHHHcccccccHHHHHHHHHHHcccHHHHHcccccccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHcccccccccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHcccccHHHccHHHHHHHHHHHcc //