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Eggerthella lenta DSM 2243 (elen0)
Gene : ACV55147.1
DDBJ      :             DNA-directed DNA polymerase
Swiss-Prot:             

Homologs  Archaea  28/68 : Bacteria  717/915 : Eukaryota  163/199 : Viruses  1/175   --->[See Alignment]
d.240.1e.8.1
:448 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   29->335 2w9bA PDBj 2e-23 27.6 %
:RPS:PDB   29->381 3bq1A PDBj 9e-71 24.5 %
:RPS:SCOP  23->260 1t94A2  e.8.1.7 * 4e-50 28.8 %
:RPS:SCOP  277->379 1jx4A1  d.240.1.1 * 5e-11 19.4 %
:HMM:SCOP  28->263 1k1sA2 e.8.1.7 * 1.5e-76 48.7 %
:HMM:SCOP  274->378 1t94A1 d.240.1.1 * 1.3e-14 32.0 %
:RPS:PFM   34->181 PF00817 * IMS 5e-30 47.6 %
:RPS:PFM   238->353 PF11799 * IMS_C 5e-09 34.6 %
:HMM:PFM   34->181 PF00817 * IMS 1.1e-45 44.9 147/150  
:HMM:PFM   238->339 PF11799 * IMS_C 4.4e-12 34.1 91/135  
:BLT:SWISS 27->429 DPO4_CLOTH 2e-88 46.2 %
:PROS 371->378|PS00369|PTS_HPR_HIS
:PROS 190->204|PS00678|WD_REPEATS_1

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACV55147.1 GT:GENE ACV55147.1 GT:PRODUCT DNA-directed DNA polymerase GT:DATABASE GIB01015CH01 GT:ORG elen0 GB:ACCESSION GIB01015CH01 GB:LOCATION 1412922..1414268 GB:FROM 1412922 GB:TO 1414268 GB:DIRECTION + GB:PRODUCT DNA-directed DNA polymerase GB:NOTE PFAM: UMUC domain protein DNA-repair protein; KEGG: DNA-directed DNA polymerase; K02346 DNA polymerase IV GB:PROTEIN_ID ACV55147.1 GB:DB_XREF GI:257474827 InterPro:IPR001020 InterPro:IPR001126 InterPro:IPR001680 LENGTH 448 SQ:AASEQ MAATGEVRVPETFGGRVIGSPESAGARRVIFHSDMNAFYASVEQAERPELRGVPLVVGGHEELRHGIVLAKSAQAKAAGVKTGEALWEARAKCPGLVVVPPRYEVYQAYSAMARRIYYQYTDLVEPFGLDEAWLDLTGSLPLLGGDPARTAAEISGRIKAELGCTVSVGVSWNKIFAKFGSDFRKPDAITFITPQNYRCRVWEAPVSELLYVGAATRAKLHSSGIDRIGELACASPELLRRRLGKIGLVLRAFARGEDATPVKPYDQARNEVDRTVKSFGNGLTAPHDIVSASDAKALVYLLSESVAQRLREARFRASTVSIGVRSARDLASYSRQTTLRRATNVTGVVARTAWGLLAANEPLDGEHPLRGLHVRASNLEPCDAPQQLELAFDARRRMLEDLDETIDDLRRRFGNTCIQRGAELLDESLLGLDIKKENVVHPVGYFYD GT:EXON 1|1-448:0| BL:SWS:NREP 1 BL:SWS:REP 27->429|DPO4_CLOTH|2e-88|46.2|394/399| PROS 371->378|PS00369|PTS_HPR_HIS|PDOC00318| PROS 190->204|PS00678|WD_REPEATS_1|PDOC00574| BL:PDB:NREP 1 BL:PDB:REP 29->335|2w9bA|2e-23|27.6|294/341| RP:PDB:NREP 1 RP:PDB:REP 29->381|3bq1A|9e-71|24.5|339/344| RP:PFM:NREP 2 RP:PFM:REP 34->181|PF00817|5e-30|47.6|145/148|IMS| RP:PFM:REP 238->353|PF11799|5e-09|34.6|107/123|IMS_C| HM:PFM:NREP 2 HM:PFM:REP 34->181|PF00817|1.1e-45|44.9|147/150|IMS| HM:PFM:REP 238->339|PF11799|4.4e-12|34.1|91/135|IMS_C| GO:PFM:NREP 3 GO:PFM GO:0003684|"GO:damaged DNA binding"|PF00817|IPR001126| GO:PFM GO:0003887|"GO:DNA-directed DNA polymerase activity"|PF00817|IPR001126| GO:PFM GO:0006281|"GO:DNA repair"|PF00817|IPR001126| RP:SCP:NREP 2 RP:SCP:REP 23->260|1t94A2|4e-50|28.8|233/308|e.8.1.7| RP:SCP:REP 277->379|1jx4A1|5e-11|19.4|98/101|d.240.1.1| HM:SCP:REP 28->263|1k1sA2|1.5e-76|48.7|236/0|e.8.1.7|1/1|DNA/RNA polymerases| HM:SCP:REP 274->378|1t94A1|1.3e-14|32.0|103/0|d.240.1.1|1/1|Lesion bypass DNA polymerase (Y-family), little finger domain| OP:NHOMO 1572 OP:NHOMOORG 909 OP:PATTERN ------1111111111--------11111111-----------1--11-2122--------1----11 211-211111111123322-23--242222223333323311-123121111353111--1131112221111111112133------2211-111---215-2233212--------------2---111111-2-----111--3--------11111111-1---1---111111111-1--------2-22323313113121212222242312-2222232222222222222222222222222226112222-21111--2321223121121111112111111111111211112111111112112222112121111111111-1-21111111211221-211321-12221111111111-13111-----212232111121111111111111-23123212231-1222222222241111111111111111111111121121211-----------------------------11111-111111111111111111211111111111111-111112111112211111-11511111111113121111211222122222-2121121231121113211-1----------------1-11122311121111111222323322221212122----121------22111322222222222-22232222222222222224321111222121312314333232-122221--211111111211---21-1114332-2132111111-----11112124111-111-111113121113211231-1111-1--212211111211212112111121------2-11--11--------1-3----1-111111111111111-111-1--------211 ----112-63A1--122222222222222222222221-1-1111112112222-222222211---1-1---1---------1-122-22222222222-11221-251532335B-11-313891618S4-55432-13-133231123219162431-323432321933731112H2222222332352222231 ------------------------------------------------------------------------------------------------------------------------------1------------------------------------------------ STR:NPRED 407 STR:RPRED 90.8 SQ:SECSTR ######HHHHTccHHH#GGcTHTTccEEcEEEEEETTHHHHHHHHHcGGGTTccEEEEEcccccccEEEEEcHHHHHTTccTTccHHHHHHHcTTcEEEEccHHHHHHHHHHHHHHHHTTccEEEEEETTEEEEEcTTTTTTcHHHHHHHHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHTccccEEEccTTTHHHHHHHccGGGcTTccHHHHHHHHTTTcccGGGTTTccHHHHHHHHccHHHHHHHHHTTccccccccEEccHHHHHcccccEEEEEEEEEEEccHccHHHHHHHHHHHHHHHHHHccccccEEEEEEEETTTccEEEEEEEcTTcccHHHHHHHHHHHHHHHHHHHcccccEEEEEEEEEcEEcHHTTEEEcccEEccTTccccccccHHHHHHHTT################################## PSIPRED ccccccEEEccccccccccccccccccEEEEEEEccHHHHHHHHHHccccccccEEEEEcccccEEEEEEccHHHHHHcccccccHHHHHHHcccEEEEcccHHHHHHHHHHHHHHHHHHcccEEEccccEEEEEccccHHHHcccHHHHHHHHHHHHHHHccccEEEEEEccHHHHHHHHHHcccccEEEEcHHHHHHHHHcccHHHHHcccHHHHHHHHHcccccHHHHHHccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccccEEEEEEEEEcccccEEEEEEcccccccHHHHHHHHHHHHHHHHcccccccEEEEEEEEcccccccccccccccccccHHHHHHHHHHHHHHHHHHccccEEEHHHHcccccccccccccccEEccccccc //