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Eggerthella lenta DSM 2243 (elen0)
Gene : ACV55155.1
DDBJ      :             DEAD/DEAH box helicase domain protein
Swiss-Prot:             

Homologs  Archaea  49/68 : Bacteria  828/915 : Eukaryota  198/199 : Viruses  1/175   --->[See Alignment]
c.37.1
:414 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   5->367 2db3A PDBj 2e-63 37.0 %
:RPS:PDB   4->350 3bxzB PDBj 1e-65 11.7 %
:RPS:SCOP  15->349 1pjrA1  c.37.1.19 * 2e-47 7.4 %
:HMM:SCOP  26->89 1uaaA1 c.37.1.19 * 8.1e-05 24.6 %
:HMM:SCOP  72->361 1wp9A2 c.37.1.19 * 2.8e-73 40.5 %
:RPS:PFM   27->190 PF00270 * DEAD 7e-34 42.3 %
:RPS:PFM   263->337 PF00271 * Helicase_C 1e-15 46.7 %
:HMM:PFM   27->192 PF00270 * DEAD 7.3e-52 43.3 164/167  
:HMM:PFM   262->338 PF00271 * Helicase_C 5.6e-29 44.2 77/78  
:BLT:SWISS 4->382 RHLE_ECOLI 2e-76 43.0 %
:PROS 152->160|PS00039|DEAD_ATP_HELICASE
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACV55155.1 GT:GENE ACV55155.1 GT:PRODUCT DEAD/DEAH box helicase domain protein GT:DATABASE GIB01015CH01 GT:ORG elen0 GB:ACCESSION GIB01015CH01 GB:LOCATION complement(1420341..1421585) GB:FROM 1420341 GB:TO 1421585 GB:DIRECTION - GB:PRODUCT DEAD/DEAH box helicase domain protein GB:NOTE PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; KEGG: vvy:VVA0731 DNA and RNA helicase GB:PROTEIN_ID ACV55155.1 GB:DB_XREF GI:257474835 InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR014001 InterPro:IPR014014 InterPro:IPR014021 LENGTH 414 SQ:AASEQ MSSTFQDLGLSETTLSAVERMGFTAPTPVQEQAIPLVLEGRDVVAAATTGTGKTAAFALPLFERIGRAKRPGSPRALVVSPTRELTQQIDAACTQLAKASNRRMLTVMGGTKYKGQIAKLDRGIDVLVATPGRLYDLMERGVVKLRDVEVLVLDEADRMLDMGFWPTMKKVVAATPSSRQTLLFSATLDRKVMQSVSSILKDPAFVEVSHKGETADTIDQFMIPVGPMKKPALLRLVLQQRGSKRVIVFADTKTRAEICTGQLKRAGFRADSIHSDKTQVQRKRALEGFSKGAIDVLVATDVLARGIDVSNIEYVVNYDLPESPEDYVHRIGRTGRAGETGYAISFVSPEAKAQLLDIEKLLGERIPTLDIDGYDATEAEKALASQFVPKATVGSAAFSRSLRRNGASGFGRRR GT:EXON 1|1-414:0| BL:SWS:NREP 1 BL:SWS:REP 4->382|RHLE_ECOLI|2e-76|43.0|377/454| PROS 152->160|PS00039|DEAD_ATP_HELICASE|PDOC00039| SEG 45->58|aaattgtgktaafa| BL:PDB:NREP 1 BL:PDB:REP 5->367|2db3A|2e-63|37.0|362/420| RP:PDB:NREP 1 RP:PDB:REP 4->350|3bxzB|1e-65|11.7|342/440| RP:PFM:NREP 2 RP:PFM:REP 27->190|PF00270|7e-34|42.3|163/167|DEAD| RP:PFM:REP 263->337|PF00271|1e-15|46.7|75/76|Helicase_C| HM:PFM:NREP 2 HM:PFM:REP 27->192|PF00270|7.3e-52|43.3|164/167|DEAD| HM:PFM:REP 262->338|PF00271|5.6e-29|44.2|77/78|Helicase_C| GO:PFM:NREP 6 GO:PFM GO:0003676|"GO:nucleic acid binding"|PF00270|IPR011545| GO:PFM GO:0005524|"GO:ATP binding"|PF00270|IPR011545| GO:PFM GO:0008026|"GO:ATP-dependent helicase activity"|PF00270|IPR011545| GO:PFM GO:0003676|"GO:nucleic acid binding"|PF00271|IPR001650| GO:PFM GO:0004386|"GO:helicase activity"|PF00271|IPR001650| GO:PFM GO:0005524|"GO:ATP binding"|PF00271|IPR001650| RP:SCP:NREP 1 RP:SCP:REP 15->349|1pjrA1|2e-47|7.4|310/315|c.37.1.19| HM:SCP:REP 26->89|1uaaA1|8.1e-05|24.6|61/0|c.37.1.19|1/1|P-loop containing nucleoside triphosphate hydrolases| HM:SCP:REP 72->361|1wp9A2|2.8e-73|40.5|269/0|c.37.1.19|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 10898 OP:NHOMOORG 1076 OP:PATTERN ---2-12122222222-11-11-2-------11111111111122232-32231---11111111-22 1221333333332332322-23113422222233333555-42343433554555423--4433433575222222221142-11111777625442--6287647AA18--------------232134333423122111112121-33111---2323323113353311111111111141221--1135777777675777777536656777222535456665575533333343333333344445354554444455445553344223333333333333333333323333333333333333333333333-634766666667663533544435-2-132114445-1111------215-6323322212333333223433333333333333-3333333323223333333333333324444254453435555555536664323------------111111111111111111333324444355555654444445544443455545452344454644575654556443353222222232244584826253214333-455545565444485624--1-------1111111116111522BB8846D7ABBBEEEEEEEEEEECEEDEDD1-2222311111165666666667667666-6666766676656666666666665566666666666656556666666665165566775566711452222244442755A434444344344444222222222256676678777777777673222222226CCCCAAAAAADDCC44565665553333232-443344--------21322212---1--12---11121-11112111------35 TRNNWTR5*SQKUTVPRSQPPPPQQPQPPQPPPNNNOPNNMMNPNORQPQPPQQPQPRPPOOPOOOONHPQOOOOOQKQROPNOOONN-NZRRORSSOQNPNQbccBU*W*lukqjxZVYOWbVtpR*W**l3uj*RYZTmWYhUQabTScSNwVhWUaZ*viaVTVkYe*iomRMbbi*hgcUcxm**R*tZYdYbbb --------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---- STR:NPRED 391 STR:RPRED 94.4 SQ:SECSTR HHccGGGcHHHHHHHHHHHHHHHTcccccHHHHHHHHHTTTTEEEEccTTccHHHHTHHHHHHHTTcccccTGccEEEEEccHHHHHHHHHTTHHHHHHTTccEEEccTTccHHHHHHHHHccEEEEEHHHHHHHHHHccccccEEEEETHHHHHTTcccccEEccEEccTTTGGGcccEEEEEEccccTTccHHHHHcccEEEEcccccccccEEcccEEEccHHHHHHHHHHHHHHHHHHTccEEEEcccHHHHHHHHHHHHHTcccccEEccccHHHHHHHHTTTTccccEEEEcTTccTTccccTTccTHEEEccccccTTHHHHHHHTccGGGcccEEEEEEEHHHHHHHHHHHHHTTcccEEcccTTcHHHHHHHHHHHTccccc####################### DISOP:02AL 414-415| PSIPRED ccccHHHccccHHHHHHHHHcccccccHHHHHHHHHHHccccEEEEEcccccHHHHHHHHHHHHHcccccccccEEEEEcccHHHHHHHHHHHHHHHHHcccEEEEEEccccHHHHHHHHHccccEEEEccHHHHHHHHcccccccccEEEEEEccHHHHccccHHHHHHHHHHccHHHcEEEEEccccHHHHHHHHHHccccEEEEEccccccccccEEEEEEEcHHHHHHHHHHHHHHcccccEEEEEccHHHHHHHHHHHHHccccEEEEEccccHHHHHHHHHHHHcccccEEEEccHHHcccccccccEEEEccccccHHHHccccccccccccccEEEEEEcHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHcccccccccccccccccccccc //