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Eggerthella lenta DSM 2243 (elen0)
Gene : ACV55205.1
DDBJ      :             ribosomal protein L20
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  909/915 : Eukaryota  49/199 : Viruses  0/175   --->[See Alignment]
a.144.2
:117 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   3->117 1vs6Q PDBj 2e-29 63.5 %
:RPS:PDB   1->116 3bboS PDBj 1e-29 33.6 %
:RPS:SCOP  3->117 1vs6Q1  a.144.2.1 * 3e-33 53.0 %
:HMM:SCOP  61->117 1gyzA_ a.144.2.1 * 2.8e-23 73.7 %
:RPS:PFM   3->109 PF00453 * Ribosomal_L20 2e-21 55.1 %
:HMM:PFM   3->109 PF00453 * Ribosomal_L20 1.8e-47 57.0 107/108  
:BLT:SWISS 1->117 RL20_LEIXX 2e-34 56.4 %
:PROS 54->70|PS00937|RIBOSOMAL_L20
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACV55205.1 GT:GENE ACV55205.1 GT:PRODUCT ribosomal protein L20 GT:DATABASE GIB01015CH01 GT:ORG elen0 GB:ACCESSION GIB01015CH01 GB:LOCATION 1480422..1480775 GB:FROM 1480422 GB:TO 1480775 GB:DIRECTION + GB:PRODUCT ribosomal protein L20 GB:NOTE TIGRFAM: ribosomal protein L20; PFAM: ribosomal protein L20; KEGG: prw:PsycPRwf_2317 50S ribosomal protein L20 GB:PROTEIN_ID ACV55205.1 GB:DB_XREF GI:257474885 InterPro:IPR005812 InterPro:IPR005813 LENGTH 117 SQ:AASEQ MPRVKRAVSAHKKRRTVLNRAKGYYGAKSRSYRAAKEQVQHSLQYMYRDRRNKKREIRRLWITRINAAARINGMSYSVLMNGLKKAGVQLDRKVLSDMAINDPAAFTAITEVAKKAL GT:EXON 1|1-117:0| BL:SWS:NREP 1 BL:SWS:REP 1->117|RL20_LEIXX|2e-34|56.4|117/130| PROS 54->70|PS00937|RIBOSOMAL_L20|PDOC00722| SEG 48->59|rdrrnkkreirr| BL:PDB:NREP 1 BL:PDB:REP 3->117|1vs6Q|2e-29|63.5|115/117| RP:PDB:NREP 1 RP:PDB:REP 1->116|3bboS|1e-29|33.6|116/119| RP:PFM:NREP 1 RP:PFM:REP 3->109|PF00453|2e-21|55.1|107/108|Ribosomal_L20| HM:PFM:NREP 1 HM:PFM:REP 3->109|PF00453|1.8e-47|57.0|107/108|Ribosomal_L20| GO:PFM:NREP 5 GO:PFM GO:0003735|"GO:structural constituent of ribosome"|PF00453|IPR005813| GO:PFM GO:0005622|"GO:intracellular"|PF00453|IPR005813| GO:PFM GO:0005840|"GO:ribosome"|PF00453|IPR005813| GO:PFM GO:0006412|"GO:translation"|PF00453|IPR005813| GO:PFM GO:0019843|"GO:rRNA binding"|PF00453|IPR005813| RP:SCP:NREP 1 RP:SCP:REP 3->117|1vs6Q1|3e-33|53.0|115/117|a.144.2.1| HM:SCP:REP 61->117|1gyzA_|2.8e-23|73.7|57/60|a.144.2.1|1/1|Ribosomal protein L20| OP:NHOMO 977 OP:NHOMOORG 958 OP:PATTERN -------------------------------------------------------------------- 1111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-1111111111111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-11111111111111111111111111111111 ----2------------------------------------------------------------------------------------------------------11111111--1----1-11-1-122---1---11--1-----------1--1------1--1----22-1217111111222-141111111 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 117 STR:RPRED 100.0 SQ:SECSTR ccccccTTHHHHHHHHHHHHcccccccTTccHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTccccHHHHHHHHHHHTcccccccGGGGTTccTTTTTHHHHHHHHHc DISOP:02AL 117-118| PSIPRED cccccccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHcccHHHHHHHHHHHHccHHHHHHHHHHHHHHc //