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Eggerthella lenta DSM 2243 (elen0)
Gene : ACV55210.1
DDBJ      :             DEAD/DEAH box helicase domain protein
Swiss-Prot:             

Homologs  Archaea  42/68 : Bacteria  825/915 : Eukaryota  198/199 : Viruses  0/175   --->[See Alignment]
c.37.1
:506 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   1->362 2db3A PDBj 1e-49 34.3 %
:RPS:PDB   1->306 3bxzB PDBj 1e-53 11.0 %
:RPS:SCOP  2->207 1fuuA  c.37.1.19 * 9e-42 28.6 %
:RPS:SCOP  213->371 1oywA3  c.37.1.19 * 5e-19 16.4 %
:HMM:SCOP  25->90 1uaaA1 c.37.1.19 * 0.0003 31.7 %
:HMM:SCOP  71->360 1wp9A2 c.37.1.19 * 3.3e-75 40.1 %
:RPS:PFM   26->187 PF00270 * DEAD 1e-29 44.1 %
:RPS:PFM   262->327 PF00271 * Helicase_C 2e-05 34.8 %
:HMM:PFM   26->192 PF00270 * DEAD 6.9e-50 44.2 165/167  
:HMM:PFM   261->337 PF00271 * Helicase_C 4.6e-29 45.5 77/78  
:BLT:SWISS 4->373 RHLE_ECOLI 2e-79 46.8 %
:PROS 151->159|PS00039|DEAD_ATP_HELICASE
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACV55210.1 GT:GENE ACV55210.1 GT:PRODUCT DEAD/DEAH box helicase domain protein GT:DATABASE GIB01015CH01 GT:ORG elen0 GB:ACCESSION GIB01015CH01 GB:LOCATION complement(1485267..1486787) GB:FROM 1485267 GB:TO 1486787 GB:DIRECTION - GB:PRODUCT DEAD/DEAH box helicase domain protein GB:NOTE PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; KEGG: ect:ECIAI39_0773 RNA helicase GB:PROTEIN_ID ACV55210.1 GB:DB_XREF GI:257474890 InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR014001 InterPro:IPR014014 InterPro:IPR014021 LENGTH 506 SQ:AASEQ MKQFNELGLSDQALEAVARLGYEAPTPVQEQAIPLALEGRDLIAAAKTGTGKTAAFSLPSLDRLGHAKGGQGPLMLVVTPTRELAQQIGEVCTAIAASTHHRILTVVGGLSYTPQINKLKHGVDILIATPGRLVDLMEQGAVRLGDVEVLVLDEADRMLDMGFWPAMKKIIGATPASRQTLLFSATIDASIKNSVGKLLHDPAFVEIAHKGETADTVEQYIVHVAQTLKPALLKAVLAEKGSDRVIVFARTRSRADSTCRRLKRAGYTAEAIHSDRSQAQRRRALDNFAAGKTGVLVATDVLARGIDVEEVDYVVNYDLPTQPEDYVHRIGRTGRAGAAGFAVSFVSPETADALRDIEKLIKRPIPEMEVPSFDAEQAAEEAAGKAARADARRDPEIKQAAKEMAARERKKAKAREQAQAEDAPKNAPKRKAPKKPVASKGAQPNRQQPGRANAKQGQPGQRSGKPASGGARPAQSSAKKGGPDLRPGRAHRASLAQQRSRGGKRK GT:EXON 1|1-506:0| BL:SWS:NREP 1 BL:SWS:REP 4->373|RHLE_ECOLI|2e-79|46.8|370/454| PROS 151->159|PS00039|DEAD_ATP_HELICASE|PDOC00039| SEG 44->55|aaaktgtgktaa| SEG 307->318|dveevdyvvnyd| SEG 329->342|rigrtgragaagfa| SEG 374->394|daeqaaeeaagkaaradarrd| SEG 398->421|kqaakemaarerkkakareqaqae| SEG 423->440|apknapkrkapkkpvask| BL:PDB:NREP 1 BL:PDB:REP 1->362|2db3A|1e-49|34.3|361/420| RP:PDB:NREP 1 RP:PDB:REP 1->306|3bxzB|1e-53|11.0|301/440| RP:PFM:NREP 2 RP:PFM:REP 26->187|PF00270|1e-29|44.1|161/167|DEAD| RP:PFM:REP 262->327|PF00271|2e-05|34.8|66/76|Helicase_C| HM:PFM:NREP 2 HM:PFM:REP 26->192|PF00270|6.9e-50|44.2|165/167|DEAD| HM:PFM:REP 261->337|PF00271|4.6e-29|45.5|77/78|Helicase_C| GO:PFM:NREP 6 GO:PFM GO:0003676|"GO:nucleic acid binding"|PF00270|IPR011545| GO:PFM GO:0005524|"GO:ATP binding"|PF00270|IPR011545| GO:PFM GO:0008026|"GO:ATP-dependent helicase activity"|PF00270|IPR011545| GO:PFM GO:0003676|"GO:nucleic acid binding"|PF00271|IPR001650| GO:PFM GO:0004386|"GO:helicase activity"|PF00271|IPR001650| GO:PFM GO:0005524|"GO:ATP binding"|PF00271|IPR001650| RP:SCP:NREP 2 RP:SCP:REP 2->207|1fuuA|9e-42|28.6|203/215|c.37.1.19| RP:SCP:REP 213->371|1oywA3|5e-19|16.4|159/200|c.37.1.19| HM:SCP:REP 25->90|1uaaA1|0.0003|31.7|63/0|c.37.1.19|1/1|P-loop containing nucleoside triphosphate hydrolases| HM:SCP:REP 71->360|1wp9A2|3.3e-75|40.1|269/0|c.37.1.19|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 9768 OP:NHOMOORG 1065 OP:PATTERN ---1--2111111121-1-----1--------1111111111112111-2112----1111111--11 1111333333332332322-23113322222233333555-32333432444333323--4432333564211111111131-11111444413221--51554269716--------------222122222212111111111121-1111----12122111-2222111111111111131111--1124555555554555555434444555222335444444454222222222222222222223333333333333333333333222233333333333333333323333333333333333333333333-523655555555553422433334-1-121113334-1111------113-3323322212333333223333333333333333-3333333323223333333333333323333233333324444444435553323------------111111111111111111333324444355555554444445544443455544452344454544565554553343353222222222244574625253214333-444534555333364424--1-------1111111115111522997646B6899ACCCCCCCCCCCBCCBCBB1-2222311111154555555555555555-55555555555555555555555544555555555555454455554555541544556644556114511111333325448323333233333333222222222256666666666666666663222222225AAAA999998BBAA44555555553333232-332222--------11222212---1--11---11-11-11111111------33 KLJLTRO5*NNHPOSOPOLNNNOPOPNOOPOOOMLMNPNNLLNONNOPMMNNNNMNOMONNNONNLNNGOPMNLNNOKOONNMNNMLN-LVNPMOSRNOMNLPabbAR*QzjufnesUSSMVcTsoP*O**l3sh*OUWPiRYgSNYXRQcQKvVfTTYW*ueYSURiXe*egdQJYWd*dcYQYuky*OznUVaVWWZ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 373 STR:RPRED 73.7 SQ:SECSTR TccGGGcHHHHHHHHHHHHHHHTcccccHHHHHHHHHTTTTEEEEccTTccHHHHTHHHHHHHTTccccEcTccEEEEEccHHHHHHHHHTTHHHHHHTTccEEEccTTccHHHHHHHHHccEEEEEHHHHHHHHHHHHTcccGGGccTHHHHHTTcccccEEccEEccTTTGGGcccEEEEEEccccTTccHHHHHcccEEEEcccccccccEEcccEEEccHHHHHHHHHHHHHHHHHHTccEEEEcccHHHHHHHHHHHHHTcccccEEccccHHHHHHHHTTTTccccEEEEcTTccTTcccEEEEEEEEcccccccEEEEEEEHcccccccccccEEEEEEccTHHHHHHHHHHHTTcccEEcccHcH##################################################################################################################################### PSIPRED cccHHHccccHHHHHHHHHcccccccHHHHHHHHHHHccccEEEEEcccccHHHHHHHHHHHHHcccccccccEEEEEcccHHHHHHHHHHHHHHHHHcccEEEEEEccccHHHHHHHHHccccEEEEccHHHHHHHHcccccccccEEEEEEccHHHHccccHHHHHHHHHHccHHHcEEEEEccccHHHHHHHHHHccccEEEEEccccccccccEEEEEEEcHHHHHHHHHHHHHHcccccEEEEEccHHHHHHHHHHHHHccccEEEEcccccHHHHHHHHHHHHcccccEEEEccHHHcccccccccEEEEccccccHHHHccccccccccccccEEEEEEcHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc //