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Eggerthella lenta DSM 2243 (elen0)
Gene : ACV55258.1
DDBJ      :             endonuclease III
Swiss-Prot:             

Homologs  Archaea  65/68 : Bacteria  874/915 : Eukaryota  180/199 : Viruses  0/175   --->[See Alignment]
a.96.1
:220 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   10->214 1p59A PDBj 8e-47 47.5 %
:RPS:PDB   9->216 2abkA PDBj 6e-47 43.6 %
:RPS:SCOP  9->215 1ornA  a.96.1.1 * 6e-66 47.1 %
:HMM:SCOP  7->219 1ornA_ a.96.1.1 * 4.1e-66 42.4 %
:RPS:PFM   45->174 PF00730 * HhH-GPD 1e-19 45.0 %
:HMM:PFM   42->179 PF00730 * HhH-GPD 7.5e-22 39.0 105/121  
:HMM:PFM   198->214 PF10576 * EndIII_4Fe-2S 1.9e-05 64.7 17/17  
:BLT:SWISS 6->216 END3_SYNY3 2e-47 45.2 %
:PROS 198->214|PS00764|ENDONUCLEASE_III_1
:PROS 110->139|PS01155|ENDONUCLEASE_III_2

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACV55258.1 GT:GENE ACV55258.1 GT:PRODUCT endonuclease III GT:DATABASE GIB01015CH01 GT:ORG elen0 GB:ACCESSION GIB01015CH01 GB:LOCATION complement(1545147..1545809) GB:FROM 1545147 GB:TO 1545809 GB:DIRECTION - GB:PRODUCT endonuclease III GB:NOTE KEGG: nis:NIS_0559 endonuclease III; TIGRFAM: endonuclease III; PFAM: HhH-GPD family protein; helix-hairpin-helix motif; SMART: HhH-GPD family protein GB:PROTEIN_ID ACV55258.1 GB:DB_XREF GI:257474938 InterPro:IPR000445 InterPro:IPR003265 InterPro:IPR004035 InterPro:IPR004036 InterPro:IPR005759 LENGTH 220 SQ:AASEQ MPRETMTAKRQRALAVAERMNEHYPAAECALHYWDDPFRLTIAVLLSAQTTDKGVNKVTPALWERYPTPADLAAADVRDVEGIIRTIGFFHTKAANVIKCAQMVVADYGGEIPRDIDELQKLPGVGRKTANVVLNEAFGIVEGIAVDTHVFRIAHRLKFAGPSADTPAKTEAALLKLYPREYWGPINHQWVLFGRETCIARNPKCATCFLCDLCPSCGKA GT:EXON 1|1-220:0| BL:SWS:NREP 1 BL:SWS:REP 6->216|END3_SYNY3|2e-47|45.2|208/219| PROS 198->214|PS00764|ENDONUCLEASE_III_1|PDOC00615| PROS 110->139|PS01155|ENDONUCLEASE_III_2|PDOC00615| BL:PDB:NREP 1 BL:PDB:REP 10->214|1p59A|8e-47|47.5|202/214| RP:PDB:NREP 1 RP:PDB:REP 9->216|2abkA|6e-47|43.6|204/211| RP:PFM:NREP 1 RP:PFM:REP 45->174|PF00730|1e-19|45.0|129/144|HhH-GPD| HM:PFM:NREP 2 HM:PFM:REP 42->179|PF00730|7.5e-22|39.0|105/121|HhH-GPD| HM:PFM:REP 198->214|PF10576|1.9e-05|64.7|17/17|EndIII_4Fe-2S| GO:PFM:NREP 1 GO:PFM GO:0006284|"GO:base-excision repair"|PF00730|IPR003265| RP:SCP:NREP 1 RP:SCP:REP 9->215|1ornA|6e-66|47.1|204/214|a.96.1.1| HM:SCP:REP 7->219|1ornA_|4.1e-66|42.4|210/214|a.96.1.1|1/1|DNA-glycosylase| OP:NHOMO 1797 OP:NHOMOORG 1119 OP:PATTERN 22-1-1111111111-2121112143353232111111111111111112223111111111111111 2121222222212121111-111111111111122221111111122121-1111221--1112111111222221221111122222111122222--22321222221222222222222221111111111213332211111223122132221211112123111111111111111112122111221222222221222222121121222222222222222222222212111122211211212111221-11122112121-11-2221111121211111111111111111111111111211111111212211111111111111111111311113111-11111111111111211212222112222122221221222222222222222-3322312322222222222222222111222221222212222222212211212111111111111111111111111111111212122221222222212222222222222122211212222222222222222222132221222222222112212312222221111111111211111124422111112222221122222221113111112122222112322221222222222211--1212212-11122222222222222222-222222222222222222222222111222222222222222222222222212222222222222212222222222122222222122111121111-11112111221111222222222222211111111122222222222222222111111112212111122222211111111112-------------------------1111111111212 11-1131-3111221111-1111111-1111111111-11-1111111111111-1111111111111112111122-2211111112-2221122211111121211712222224121212242151GG6-313-1-122222-111-21-2232221111221111111132223292331-4--1-322232322 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 215 STR:RPRED 97.7 SQ:SECSTR ##HHHHHHcHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHTTTccHHHHHHHHHHHTTTcccHHHHHHHHHHHHHHHHTTcTTHHHHHHHHHHHHHHHHHHTTTcccccHHHHHHcTTccHHHHHHHHHHHHccTccccccHHHHHHHHHHcHcccccccHHHHHHHHHHHccGGGTTTHHHHHHHHHHHTcccccccGGGcTTGGGcccc### PSIPRED cccccccHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHccccHHHHHHHHHHHHHHcccHHHHHcccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHcccccccHHHHHHcccccHHHHHHHHHHHccccccccHHHHHHHHHHHHcccccccccHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHcccccccccccccHHccHHHccc //