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Eggerthella lenta DSM 2243 (elen0)
Gene : ACV55297.1
DDBJ      :             chromosome segregation and condensation protein, ScpB
Swiss-Prot:             

Homologs  Archaea  4/68 : Bacteria  577/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
a.4.5
:269 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   5->162 2z99A PDBj 3e-30 42.7 %
:RPS:SCOP  6->84 1t6sA1  a.4.5.60 * 1e-15 29.1 %
:RPS:SCOP  91->162 1t6sA2  a.4.5.60 * 1e-06 44.4 %
:HMM:SCOP  3->85 1t6sA1 a.4.5.60 * 6.4e-20 43.4 %
:HMM:SCOP  86->162 1t6sA2 a.4.5.60 * 1.3e-23 54.5 %
:RPS:PFM   14->171 PF04079 * DUF387 1e-36 49.4 %
:HMM:PFM   13->171 PF04079 * DUF387 1.3e-57 51.3 158/159  
:BLT:SWISS 8->179 SCPB_MOOTA 2e-35 43.3 %
:BLT:SWISS 177->220 GATA_PROM4 8e-04 38.6 %

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACV55297.1 GT:GENE ACV55297.1 GT:PRODUCT chromosome segregation and condensation protein, ScpB GT:DATABASE GIB01015CH01 GT:ORG elen0 GB:ACCESSION GIB01015CH01 GB:LOCATION 1592536..1593345 GB:FROM 1592536 GB:TO 1593345 GB:DIRECTION + GB:PRODUCT chromosome segregation and condensation protein, ScpB GB:NOTE TIGRFAM: segregation and condensation protein B; PFAM: chromosome segregation and condensation protein ScpB; KEGG: dol:Dole_2759 segregation and condensation protein B GB:PROTEIN_ID ACV55297.1 GB:DB_XREF GI:257474977 InterPro:IPR005234 LENGTH 269 SQ:AASEQ MFQGLQDNQLKGAIEAMLFVTDEPVGTIALADMLEVEPGQAERALVELRDQLEGENRGIQLREVAGGWRLYTHPAYHELIERYVLSWDTRKLSQAAMETLAIVAYLQPVTRSGVASVRGVNSDSSINSLVEKGLVREAGVADAPGNPTLYATTRAFLEKFGLRSTADLPDLDQFAPDDDTRAFIRERLSATREDAFVADDARLDGDEADPLDGVRFELDDEGPGSIAESPREEAASDAAQQMLAEAMASGFGLVEKIDFDNLTFETDDE GT:EXON 1|1-269:0| BL:SWS:NREP 2 BL:SWS:REP 8->179|SCPB_MOOTA|2e-35|43.3|171/195| BL:SWS:REP 177->220|GATA_PROM4|8e-04|38.6|44/100| BL:PDB:NREP 1 BL:PDB:REP 5->162|2z99A|3e-30|42.7|157/160| RP:PFM:NREP 1 RP:PFM:REP 14->171|PF04079|1e-36|49.4|158/160|DUF387| HM:PFM:NREP 1 HM:PFM:REP 13->171|PF04079|1.3e-57|51.3|158/159|DUF387| RP:SCP:NREP 2 RP:SCP:REP 6->84|1t6sA1|1e-15|29.1|79/85|a.4.5.60| RP:SCP:REP 91->162|1t6sA2|1e-06|44.4|72/77|a.4.5.60| HM:SCP:REP 3->85|1t6sA1|6.4e-20|43.4|83/0|a.4.5.60|1/1|"Winged helix" DNA-binding domain| HM:SCP:REP 86->162|1t6sA2|1.3e-23|54.5|77/0|a.4.5.60|1/1|"Winged helix" DNA-binding domain| OP:NHOMO 601 OP:NHOMOORG 582 OP:PATTERN -----------------------1------------------------11-----1------------ 1111111111111111111-11111111111111111111111111-111111111-1--111-1111111----11111111----------------------11-1---------------111111111-1111111---11--1---------------1-1---1------------111111111111111111111111111111111111111111111111111111111-111111-11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-11-1-111111111-111111111-----31-113111111111111111112------1--451-1114111111111211111111112211111111111111111-----------------------------11111-111111111111111111111111111111111111111111111111111111111111-111111111111-1-----------111111111111111---------------------------1111-111-111-1111111111111111111--11111--------------------------------------------------------------------------------------------11111111111111----------------11111111111111111111111111111------------------------11111111111111----111111--------11-----1-11-1111111111111111-1---11111-1- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 158 STR:RPRED 58.7 SQ:SECSTR ####ccHHHHHHHHHHHHHHccccccHHHHHHHHTccHHHHHHHHHHHHHHHHHTTccEEEEEETTEEEEEEcGGGHHHHHHHHHHHHcccccHHHHHHHHHHHHHccEEHHHHHHHHTcccHHHHHHHHHTTcEEEEEEEcTTTccEEEEEcHHHHHHHcc########################################################################################################### DISOP:02AL 269-270| PSIPRED ccccccHHHHHHHHHHHHHHccccccHHHHHHHHcccHHHHHHHHHHHHHHHccccccEEEEEEccEEEEEEcHHHHHHHHHHHcccccccccHHHHHHHHHHHHcccccHHHHHHHccccHHHHHHHHHHcccEEEccccccccccEEEEccHHHHHHcccccHHHcccHHHHccHHHHHHHHHHHcccccccccccccccccccHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHHccccccccccccccccccccc //