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Eggerthella lenta DSM 2243 (elen0)
Gene : ACV55338.1
DDBJ      :             transcriptional regulator, PadR-like family
Swiss-Prot:             

Homologs  Archaea  1/68 : Bacteria  60/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.4.5
:113 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   30->82 3f8bA PDBj 1e-04 34.0 %
:RPS:PDB   48->107 2a61B PDBj 3e-04 22.4 %
:RPS:SCOP  17->88 1yg2A  a.4.5.61 * 1e-05 23.9 %
:HMM:SCOP  5->105 1xmaA_ a.4.5.61 * 8.2e-14 28.3 %
:RPS:PFM   26->87 PF03551 * PadR 6e-05 42.6 %
:HMM:PFM   16->88 PF03551 * PadR 1.7e-17 33.3 72/86  
:BLT:SWISS 28->89 YQJI_SHIFL 7e-04 29.0 %

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACV55338.1 GT:GENE ACV55338.1 GT:PRODUCT transcriptional regulator, PadR-like family GT:DATABASE GIB01015CH01 GT:ORG elen0 GB:ACCESSION GIB01015CH01 GB:LOCATION 1637654..1637995 GB:FROM 1637654 GB:TO 1637995 GB:DIRECTION + GB:PRODUCT transcriptional regulator, PadR-like family GB:NOTE PFAM: transcriptional regulator PadR family protein; KEGG: bcb:BCB4264_A3014 hypothetical protein GB:PROTEIN_ID ACV55338.1 GB:DB_XREF GI:257475018 InterPro:IPR005149 LENGTH 113 SQ:AASEQ MAKKSPYETGELSDSIFLILLATLEPVHGYRIMQGVEESTDGAVKIGPATMYTTLKKLKAAGWIVEIAEDESRILYAATDEGRAVLERDFVRRKRLVAFAEAQLGEAGEENHG GT:EXON 1|1-113:0| BL:SWS:NREP 1 BL:SWS:REP 28->89|YQJI_SHIFL|7e-04|29.0|62/207| BL:PDB:NREP 1 BL:PDB:REP 30->82|3f8bA|1e-04|34.0|53/101| RP:PDB:NREP 1 RP:PDB:REP 48->107|2a61B|3e-04|22.4|58/137| RP:PFM:NREP 1 RP:PFM:REP 26->87|PF03551|6e-05|42.6|61/84|PadR| HM:PFM:NREP 1 HM:PFM:REP 16->88|PF03551|1.7e-17|33.3|72/86|PadR| RP:SCP:NREP 1 RP:SCP:REP 17->88|1yg2A|1e-05|23.9|67/169|a.4.5.61| HM:SCP:REP 5->105|1xmaA_|8.2e-14|28.3|99/0|a.4.5.61|1/1|"Winged helix" DNA-binding domain| OP:NHOMO 83 OP:NHOMOORG 61 OP:PATTERN ---------------------------------------------1---------------------- -------------------------------------------------------------------1----------1111------------------------------------------------------------------------------------1--------------------------12222222213211221-11--222---1--21111---1----------------------------------------------111----1--------------------------111---111---1--2221-22-1-1-------111-------------------------------------------------------------------------------------------------------------------1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 97 STR:RPRED 85.8 SQ:SECSTR ##########ccHHHHHHHHHHHHTTTEEEGGGHHHHHHHHHcccccHHHHHHHHHHHHHTTcEEEEEEEcccEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHcHH###### PSIPRED cccccccHHccccHHHHHHHHHHcccccHHHHHHHHHHHHcccEEccccHHHHHHHHHHHcccEEEEcccccEEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccc //