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Eggerthella lenta DSM 2243 (elen0)
Gene : ACV55391.1
DDBJ      :             excinuclease ABC, A subunit
Swiss-Prot:             

Homologs  Archaea  27/68 : Bacteria  892/915 : Eukaryota  6/199 : Viruses  0/175   --->[See Alignment]
a.138.1c.37.1e.11.1
:963 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   6->155,218->962 2r6fA PDBj 0.0 59.3 %
:RPS:PDB   1->392 1bjtA PDBj 2e-63 10.7 %
:RPS:PDB   499->959 3dt2A PDBj 2e-27 9.1 %
:RPS:SCOP  1->380 1bgwA  e.11.1.1 * 2e-53 11.2 %
:RPS:SCOP  366->593 1f2t.1  c.37.1.12 * 2e-24 25.4 %
:RPS:SCOP  746->840 1d4cA1  a.138.1.3 * 2e-22 12.0 %
:RPS:SCOP  840->942 1l7vC  c.37.1.12 * 4e-15 27.8 %
:HMM:SCOP  6->589 1ii8.1 c.37.1.12 * 3.7e-48 24.9 %
:HMM:SCOP  632->941 1f2t.1 c.37.1.12 * 4.9e-50 27.5 %
:HMM:PFM   484->535 PF00005 * ABC_tran 4.3e-07 42.9 49/118  
:HMM:PFM   789->879 PF00005 * ABC_tran 9.9e-14 33.3 87/118  
:HMM:PFM   652->690 PF03193 * DUF258 0.00028 36.8 38/161  
:HMM:PFM   757->789 PF00684 * DnaJ_CXXCXGXG 0.00034 27.3 33/79  
:BLT:SWISS 1->959 UVRA_BACSU 0.0 58.1 %
:PROS 507->521|PS00211|ABC_TRANSPORTER_1
:PROS 848->862|PS00211|ABC_TRANSPORTER_1
:REPEAT 2|319->612|675->954
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACV55391.1 GT:GENE ACV55391.1 GT:PRODUCT excinuclease ABC, A subunit GT:DATABASE GIB01015CH01 GT:ORG elen0 GB:ACCESSION GIB01015CH01 GB:LOCATION 1692893..1695784 GB:FROM 1692893 GB:TO 1695784 GB:DIRECTION + GB:PRODUCT excinuclease ABC, A subunit GB:NOTE TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; KEGG: bsu:BSU35160 excinuclease ABC subunit A GB:PROTEIN_ID ACV55391.1 GB:DB_XREF GI:257475071 InterPro:IPR003439 InterPro:IPR004602 InterPro:IPR017871 LENGTH 963 SQ:AASEQ MGQNAIVIKGAREHNLKDIDLSIPRDELVVITGLSGSGKSSLAFDTMYAEGQRRYVESLSSYARMFLGQMSKPDLDSIDGLSPAVSIDQKTTSKNPRSTVGTTTEIYDYLRLLFARVGVPHCPECGRVIKKQTTDQVTDEILALAPDAKAIIMAPVVAGRKGEFTKLFADLQKEGFSRVRIDGEIVKLDGEPRTLNKKIKHFIDVVVDRVQLKASATSRIAEAVELATKLADGRVLVQVLGDDGKPLGEGGGRSSGATGGLGAGEHIFSLALACPEHGHSMDELQPRDFSFNAPYGACPDCLGIGSREEVDASLVAPDPSLSLNEGAIAPFKTGNYYPQVLRAVAAHLGTDADTPWEDMPKKAQDGLLHGLGKDKVRVDYVTVDGRETYWYIEWEGALAAVQRRYQEAQSDAQREKLASYFAIVPCPTCGGKRLKPEILAVTVNERSIHDITEMSAADSLEFFDGLAFHGSEEHIAGPIVKEIKARLKFLVDVGLDYLTLERATATLSGGEAQRIRLATQIGAGLMGVLYILDEPSIGLHQRDNERLIATLERLRDLGNTVIVVEHDEDTIRSADFVVDMGPGAGEHGGEIVAIGTPDEIMKAEGSLTADYLSGRRRIEVPEKRRKPRRGSLKLTGATENNLHNVTLEVPFGTLTVVTGVSGSGKSSLVTDTLAPALANRVNHAHRRTGAYKKITGLDKIDKVINIDQSPIGRTPRSNPATYIGLWDDIRALFASTQESKARGYSPGRFSFNVNGGRCEACKGDGQIKIEMHFLPDIYVPCEVCGGDRYNRETLQVTYRGKNIAEVLDMTVEDALAFFENIPGIKRKLQTLFDVGLGYIRLGQPATTLSGGEAQRVKLASELQRRQTGKTFYILDEPTTGLHFEDVRQLLIVLQRLVDAGNTVLVIEHNLDVIKCADRIVDLGPEGGERGGTVVAQGTPEEVAQVEGSYTGAFVKKMLEDGRL GT:EXON 1|1-963:0| BL:SWS:NREP 1 BL:SWS:REP 1->959|UVRA_BACSU|0.0|58.1|937/957| PROS 507->521|PS00211|ABC_TRANSPORTER_1|PDOC00185| PROS 848->862|PS00211|ABC_TRANSPORTER_1|PDOC00185| NREPEAT 1 REPEAT 2|319->612|675->954| SEG 240->265|lgddgkplgegggrssgatgglgage| SEG 652->670|gtltvvtgvsgsgksslvt| SEG 886->897|vrqllivlqrlv| BL:PDB:NREP 1 BL:PDB:REP 6->155,218->962|2r6fA|0.0|59.3|859/884| RP:PDB:NREP 2 RP:PDB:REP 1->392|1bjtA|2e-63|10.7|364/679| RP:PDB:REP 499->959|3dt2A|2e-27|9.1|451/621| HM:PFM:NREP 4 HM:PFM:REP 484->535|PF00005|4.3e-07|42.9|49/118|ABC_tran| HM:PFM:REP 789->879|PF00005|9.9e-14|33.3|87/118|ABC_tran| HM:PFM:REP 652->690|PF03193|0.00028|36.8|38/161|DUF258| HM:PFM:REP 757->789|PF00684|0.00034|27.3|33/79|DnaJ_CXXCXGXG| RP:SCP:NREP 4 RP:SCP:REP 1->380|1bgwA|2e-53|11.2|339/679|e.11.1.1| RP:SCP:REP 366->593|1f2t.1|2e-24|25.4|228/288|c.37.1.12| RP:SCP:REP 746->840|1d4cA1|2e-22|12.0|92/102|a.138.1.3| RP:SCP:REP 840->942|1l7vC|4e-15|27.8|97/231|c.37.1.12| HM:SCP:REP 6->589|1ii8.1|3.7e-48|24.9|338/370|c.37.1.12|1/2|P-loop containing nucleoside triphosphate hydrolases| HM:SCP:REP 632->941|1f2t.1|4.9e-50|27.5|287/0|c.37.1.12|2/2|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 1292 OP:NHOMOORG 925 OP:PATTERN ------------------------11111111111---1111123111-2111-------------11 2341432222222211111-12111311111123333233122232132222333213112232322244432224331122111111222223222--2222324242311111111111111222222222222222221113111111111111111111111111111111111111112121111111122222221121122122111112211122113222222231111111111111133224223133112224422432112221111111111111111111111111111111111111111111111112221333234212135111111311111111122211111111111111423111111111112111111111111111111111-221221121111111111111211111111111111111212222221112111111111111--11111111111111111111211112222222222322222324322221222323221122222322232222211111111111111111122121211111111111111112211111114412111111111111111-11111111111111211112121111111111111111112--12222------11121111111111111-11-1111111111111111111111111111111111111111111111111-111111111111--1111111222211112111211111-111111112211121111111222212222111111111111111111111111111132222221111111111111111111111111111111-1-11111111111111111111211111111223 ---------------------------------------------------------------------------------------------------1---------------------------------------------------------------1----------1----------1--1-----1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 943 STR:RPRED 97.9 SQ:SECSTR HHHHHHcccTTTcccHHHHHHHHHHHHHTccccEEHHHHHHHHHHHHcccccccHHHHHHHHHcccTTccccccEEEEccccccTTTTcTEEEETcccGGGcEEEEcTTHHHHccGGGGGGccEEEEEEccccHHHHHHHHHHHHTTccccccccccTTcccEEEEEEETTEEEEEcEEEEEETTEEEEEEcccTTccHHHHHHHHHHHHcccTTccccccEEEEcccccccEEEEccHHHHHHE####################HHHHcHHHHTTcEEEEEcTTEEEEcTTccEEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTccccTTccHHHHHHHHHHTTccEEcTTccEEcccccTTTcccHHHHHHHHHHHHHHHHcccccEEEETTTEEEEEcHHHHHHHHHHccTTGGGccccccEEGGGccccTTcHHHHHHHHHTTcccHHHHHHHHHHHHHHHcccEEEEEccHHHHHHHHTccccccEEEccGGGHHHHHHHcccGGGcTTccHHHHHHHHHTHTcccHHHHHHccHHHHHHHHcHHHHHHHHHHHTccTcccccccccccccEEEEHHHEEccccccccccTTHHHHHHHHHTTHHHHHHHHcccEEEEEEEEccEEcHHHHHHHTTcccEEEEEEccccccccccccTTccccGGGcEEEEEGGGTEEEEccccHHHHcTTTHHHHTHHHHHHHHHHTcEEEccEEEHHHEEEcTTccEEEEEEEccTTccHHHHHTcccccTTcEEEEEEccccEEEEccccEEEEEcTTccTTTcHHHHHHTTcccEEEccEcTTccccccTTccEEcTTccEEcTTcccHHHccccTTcEEEEEGGGcTTccTTTEEEEEEEEEcccccccccEEEcccHHHHHHHHTcEEEccccccccTTcEEEcGGGcTTTccccHHHHHHHHHHHcccc PSIPRED ccccEEEEEccEEccccccEEEEccccEEEEEccccccccEEHHHHHHHHHHHHHHHHccHHHHHHcccccccccccEEccccEEEEEEcccccccccccccHHHHHHHHHHHHHHHccccccccccccEEccHHHHHHHHHccccccEEEEEccEEcccccHHHHHHHHHHHcccEEEEEccEEEEcccccHHHHHcccccEEEEEEEEEEccccHHHHHHHHHHHHHHcccEEEEEEcccccccccccccccccccccccHHHHHHHHHcccccccEEcccccccccccccccccccccccccEEEcccHHHccccccccHHHccccccccccHHHHHHHHHHHHccccccccHHHccHHHHHHHEEcccccEEEEEEEccccccEEEEEEEccHHHHHHHHHHHHccHHHHHHHHHHHccccccccccccccccccEEEEccEEHHHHHcccHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHcccccEEEEccccccccHHHHHHHHHHHHHHHHHccEEEEEEccHHHHHHccEEEEEcccccccccEEEEEccHHHHHHccccEEHHHHccccccccccccccccccEEEEEEEccEEEEEEEEEEEcccEEEEEEcccccHHHHHHHHHHHHHHHHHccccccccccEEEccccccccEEEEccccccccccccccHHccccHHHHHHHHHHHHHHHHccccHHEEccccccEEEcccccEEEEEEcEEcccEEEEcccccccccccEEEEEEEEcccHHHHHcccHHHHHHHHHccHHHHHHHHHHHHcccHHHccccccccccHHHHHHHHHHHHHHHcccccEEEEEEcccccccHHHHHHHHHHHHHHHHcccEEEEEEccHHHHHHccEEEEccccccccccEEEEEccHHHHHccccHHHHHHHHHHHHcccc //