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Eggerthella lenta DSM 2243 (elen0)
Gene : ACV55418.1
DDBJ      :             Rhomboid family protein
Swiss-Prot:             

Homologs  Archaea  5/68 : Bacteria  130/915 : Eukaryota  19/199 : Viruses  0/175   --->[See Alignment]
f.51.1
:263 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   42->146 2nr9A PDBj 9e-07 30.2 %
:RPS:SCOP  42->144 2ic8A1  f.51.1.1 * 5e-16 22.1 %
:HMM:SCOP  35->237 2nr9A1 f.51.1.1 * 4.1e-35 36.0 %
:RPS:PFM   90->143 PF01694 * Rhomboid 9e-09 46.3 %
:HMM:PFM   86->228 PF01694 * Rhomboid 5.4e-32 34.8 138/146  
:HMM:PFM   224->255 PF10823 * DUF2568 0.001 18.8 32/93  
:BLT:SWISS 43->144 GLUP_BACSU 9e-15 39.8 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACV55418.1 GT:GENE ACV55418.1 GT:PRODUCT Rhomboid family protein GT:DATABASE GIB01015CH01 GT:ORG elen0 GB:ACCESSION GIB01015CH01 GB:LOCATION 1728667..1729458 GB:FROM 1728667 GB:TO 1729458 GB:DIRECTION + GB:PRODUCT Rhomboid family protein GB:NOTE PFAM: Rhomboid family protein; KEGG: bsu:BSU24870 hypothetical protein GB:PROTEIN_ID ACV55418.1 GB:DB_XREF GI:257475098 InterPro:IPR002610 LENGTH 263 SQ:AASEQ MPYKVNEPVEPQQRAVIDDDQLKRMMADSQPSFFERNRYRLVTLALIAINVAVFALEAVLSGMRIDISTRTLVDMGAMYAPLVQSPADLYRFVTPMFLHMDLMHLGFNMVALYSVGEVLERTLGKGSYLALYFIAGITGNAVSYAADVLLGGGSAVSAGASTSVFGLFVAVALLAVLHKGNRSLFTQYSKGMLGVIAVNVAYTLLVPNISVSGHLGGALGGLVAMFMIPAASLRVPNPVRVVVAVLWVAALVWLLVSQGVLGV GT:EXON 1|1-263:0| BL:SWS:NREP 1 BL:SWS:REP 43->144|GLUP_BACSU|9e-15|39.8|98/507| TM:NTM 7 TM:REGION 44->66| TM:REGION 76->98| TM:REGION 128->150| TM:REGION 157->179| TM:REGION 189->211| TM:REGION 215->237| TM:REGION 241->263| SEG 148->164|vllgggsavsagastsv| SEG 169->177|vavallavl| SEG 213->222|ghlggalggl| SEG 233->256|lrvpnpvrvvvavlwvaalvwllv| BL:PDB:NREP 1 BL:PDB:REP 42->146|2nr9A|9e-07|30.2|96/192| RP:PFM:NREP 1 RP:PFM:REP 90->143|PF01694|9e-09|46.3|54/146|Rhomboid| HM:PFM:NREP 2 HM:PFM:REP 86->228|PF01694|5.4e-32|34.8|138/146|Rhomboid| HM:PFM:REP 224->255|PF10823|0.001|18.8|32/93|DUF2568| GO:PFM:NREP 2 GO:PFM GO:0004252|"GO:serine-type endopeptidase activity"|PF01694|IPR002610| GO:PFM GO:0016021|"GO:integral to membrane"|PF01694|IPR002610| RP:SCP:NREP 1 RP:SCP:REP 42->144|2ic8A1|5e-16|22.1|95/182|f.51.1.1| HM:SCP:REP 35->237|2nr9A1|4.1e-35|36.0|189/0|f.51.1.1|1/1|Rhomboid-like| OP:NHOMO 160 OP:NHOMOORG 154 OP:PATTERN -----1----------1-----------------------------------------11----2--- -11-1------------11-11---111111-1111----111-----------------11---1-1--1-111-11--11-----1-------------------------------------------------111----1-----11----------------------------------------1----------------121111---1-1-1-1-11111---111111111111111----1-1-11-11-1111111-111--------1----11-------------------------1-1111111---11-1-----1-11-1111111111------11-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-----------------------------------------------------------1---------------121---1--1----1--------------------------------------------------------------------------------------------------------------------------------------1--1----------------------------------------------------------------------------------------------------------1-111---1---- ----1---1------------------11-1-1--1-------111-------------------------------------------------1-------------------------------------------------------------------------------11---111--------231----- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 96 STR:RPRED 36.5 SQ:SECSTR #########################################HHHHHHHHHHHHHHHHHT##TcHHHH#######HHHHcccccGGGGcTTHHHHGGGccccHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHH##################################################################################################################### PSIPRED cccccccccccccccccccHHHHHHHHHcccHHHHHccccHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHccccHHHHccccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHcc //