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Eggerthella lenta DSM 2243 (elen0)
Gene : ACV55457.1
DDBJ      :             transcriptional regulator, TetR family
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  20/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.4.1
:212 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   7->61 2qopA PDBj 5e-11 52.7 %
:RPS:PDB   8->74 3cjdB PDBj 8e-14 23.9 %
:RPS:SCOP  7->77 2g7sA1  a.4.1.9 * 5e-14 21.1 %
:HMM:SCOP  2->77 2fd5A1 a.4.1.9 * 2.5e-15 36.8 %
:RPS:PFM   13->59 PF00440 * TetR_N 3e-08 48.9 %
:HMM:PFM   13->59 PF00440 * TetR_N 9.4e-17 44.7 47/47  
:BLT:SWISS 7->61 ACRR_SHIFL 1e-10 52.7 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACV55457.1 GT:GENE ACV55457.1 GT:PRODUCT transcriptional regulator, TetR family GT:DATABASE GIB01015CH01 GT:ORG elen0 GB:ACCESSION GIB01015CH01 GB:LOCATION 1780000..1780638 GB:FROM 1780000 GB:TO 1780638 GB:DIRECTION + GB:PRODUCT transcriptional regulator, TetR family GB:NOTE PFAM: regulatory protein TetR; KEGG: sdy:SDY_0455 DNA-binding transcriptional repressor GB:PROTEIN_ID ACV55457.1 GB:DB_XREF GI:257475137 InterPro:IPR001647 LENGTH 212 SQ:AASEQ MSNGNYQETHERILKSGLAAFLEEGFEKANLRRICKAAGVTTGAFYKHFKDKEALFSELVEPLASMIRKAYAQGEKRGFAGYDEGKPVTPEQVRAALEAKAAGTLATTAMLYSHRDIYELLVFRSYGTPYEHFLDWLVDEEDRTTLRVLELIHGAEKARTVISKESLHIVNHAFYSALSENIIHAKSVEELNATTEVISTFFNAGWEKYRTL GT:EXON 1|1-212:0| BL:SWS:NREP 1 BL:SWS:REP 7->61|ACRR_SHIFL|1e-10|52.7|55/215| SEG 95->111|aaleakaagtlattaml| BL:PDB:NREP 1 BL:PDB:REP 7->61|2qopA|5e-11|52.7|55/207| RP:PDB:NREP 1 RP:PDB:REP 8->74|3cjdB|8e-14|23.9|67/177| RP:PFM:NREP 1 RP:PFM:REP 13->59|PF00440|3e-08|48.9|47/47|TetR_N| HM:PFM:NREP 1 HM:PFM:REP 13->59|PF00440|9.4e-17|44.7|47/47|TetR_N| GO:PFM:NREP 2 GO:PFM GO:0003700|"GO:transcription factor activity"|PF00440|IPR001647| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00440|IPR001647| RP:SCP:NREP 1 RP:SCP:REP 7->77|2g7sA1|5e-14|21.1|71/74|a.4.1.9| HM:SCP:REP 2->77|2fd5A1|2.5e-15|36.8|76/0|a.4.1.9|1/1|Homeodomain-like| OP:NHOMO 38 OP:NHOMOORG 20 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------56------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------111------------------------1----------1---1111111-1-------------------33----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11------------6---------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 204 STR:RPRED 96.2 SQ:SECSTR #ccccHTHHHHHHHHHHHHHHHHHcGGGccHHHHHHHHTccHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHccGGGcHHGGTcTTcccHHHHHHHHHHHHHHHHHHHHccccTTTHHHHHHHTTcccccTTcTTTHHHHHHHHHHHHHHHHHHHHHHTTccccccHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHHHHT####### PSIPRED ccHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHcccHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHcc //