[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Eggerthella lenta DSM 2243 (elen0)
Gene : ACV55489.1
DDBJ      :             Relaxase/mobilization nuclease family protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  2/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:416 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   217->285 1xodB PDBj 7e-04 44.8 %
:RPS:PFM   81->271 PF03432 * Relaxase 1e-06 26.1 %
:HMM:PFM   54->284 PF03432 * Relaxase 1.9e-17 23.5 196/242  
:BLT:SWISS 36->283 RLX1_STAAU 5e-08 27.1 %
:COIL
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACV55489.1 GT:GENE ACV55489.1 GT:PRODUCT Relaxase/mobilization nuclease family protein GT:DATABASE GIB01015CH01 GT:ORG elen0 GB:ACCESSION GIB01015CH01 GB:LOCATION complement(1816430..1817680) GB:FROM 1816430 GB:TO 1817680 GB:DIRECTION - GB:PRODUCT Relaxase/mobilization nuclease family protein GB:NOTE PFAM: Relaxase/mobilization nuclease family protein; KEGG: GF21209 gene product from transcript GF21209- RA GB:PROTEIN_ID ACV55489.1 GB:DB_XREF GI:257475169 InterPro:IPR005094 LENGTH 416 SQ:AASEQ MPLLKPIAGHTGCAGIKHYLEKGGRALGIMVMNFAWQEERAFEDVSAAPAGFDWADSMDATRRACGNDTPYRGKPARTFKHFVMSPDPQDGLTADQVAELASAWALRHFADFEAAIVLHDDNERRIPHAHIVVNNTNLATERRLQTPDPLELNRSLQDLAEERGYRFMRNDTVREEDEGQTRKATPATLQSVYMRRAEREIQKEGGYSWVADIRNRVTVAKALARNEDEFMAVLEALEVDVSQNSEKSWRRDWIYSLSDHPTWRIGGEKLGLSFGQEALRRRFDRIAAWHPAPAASRRILSEAESAIELNDLSELERLAGAIEAFMSANAHSLADLDRRIERLEGRADGDSAERAEALREVRAYAAANRLLPETAQTRRQRQPQGEEAPVRRGDAKPRSRETQAQQERRRERRELR GT:EXON 1|1-416:0| BL:SWS:NREP 1 BL:SWS:REP 36->283|RLX1_STAAU|5e-08|27.1|218/320| COIL:NAA 30 COIL:NSEG 1 COIL:REGION 332->361| SEG 352->367|aeraealrevrayaaa| SEG 398->415|rsretqaqqerrrerrel| BL:PDB:NREP 1 BL:PDB:REP 217->285|1xodB|7e-04|44.8|67/118| RP:PFM:NREP 1 RP:PFM:REP 81->271|PF03432|1e-06|26.1|165/219|Relaxase| HM:PFM:NREP 1 HM:PFM:REP 54->284|PF03432|1.9e-17|23.5|196/242|Relaxase| OP:NHOMO 4 OP:NHOMOORG 2 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------31----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 67 STR:RPRED 16.1 SQ:SECSTR ########################################################################################################################################################################################################################EEEEEccccTTccEEEEEEETT#TTEEEEEEEEcTTcccEEEE#TTEEETTEEEEEEEccHHHHHHHHH################################################################################################################################### DISOP:02AL 311-311,314-314,319-319| PSIPRED ccccccccccccHHHHHHHHHHcccEEEEEEEEcccHHHHHHHHHHccccccHHHHHHHHHHHcccccccccccccccEEEEEEcccccccccHHHHHHHHHHHHHHHccccEEEEEEEccccccccccEEEEEcccccccccccccccHHccHHHHHHHHHccHHHHccccHHHHcccccccccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccEEEEEccccEEEEEEcccccccccccccccccccccHHHHHHHHHHHHccccccHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHcc //