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Eggerthella lenta DSM 2243 (elen0)
Gene : ACV55610.1
DDBJ      :             protein of unknown function UPF0054
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  306/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
d.92.1
:153 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   35->130 1oz9A PDBj 4e-14 44.2 %
:RPS:SCOP  1->147 1xm5A  d.92.1.15 * 3e-25 32.4 %
:HMM:SCOP  3->150 1tviA_ d.92.1.15 * 4.1e-36 45.5 %
:RPS:PFM   11->149 PF02130 * UPF0054 7e-15 41.8 %
:HMM:PFM   18->149 PF02130 * UPF0054 8.6e-44 42.9 126/145  
:BLT:SWISS 13->150 Y1268_FRASC 5e-22 39.4 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACV55610.1 GT:GENE ACV55610.1 GT:PRODUCT protein of unknown function UPF0054 GT:DATABASE GIB01015CH01 GT:ORG elen0 GB:ACCESSION GIB01015CH01 GB:LOCATION complement(1942864..1943325) GB:FROM 1942864 GB:TO 1943325 GB:DIRECTION - GB:PRODUCT protein of unknown function UPF0054 GB:NOTE PFAM: protein of unknown function UPF0054; KEGG: bha:BH1363 hypothetical protein GB:PROTEIN_ID ACV55610.1 GB:DB_XREF GI:257475290 InterPro:IPR002036 LENGTH 153 SQ:AASEQ MDIQINYDYRKEDLEKLPLHELTQFVLAREDKPFNTEVSISFVTDEAIAELNERYRHKEGPTDVLSFECDGVDDDLSAMTLAEDPVYELGDVVIAPDVASRQTREFGTTFEEEISLLLVHGLLHLCGYDHIEDDEAEVMEKREAEILEAWSKR GT:EXON 1|1-153:0| BL:SWS:NREP 1 BL:SWS:REP 13->150|Y1268_FRASC|5e-22|39.4|137/201| SEG 116->125|lllvhgllhl| BL:PDB:NREP 1 BL:PDB:REP 35->130|1oz9A|4e-14|44.2|86/141| RP:PFM:NREP 1 RP:PFM:REP 11->149|PF02130|7e-15|41.8|134/142|UPF0054| HM:PFM:NREP 1 HM:PFM:REP 18->149|PF02130|8.6e-44|42.9|126/145|UPF0054| GO:PFM:NREP 2 GO:PFM GO:0008237|"GO:metallopeptidase activity"|PF02130|IPR002036| GO:PFM GO:0008270|"GO:zinc ion binding"|PF02130|IPR002036| RP:SCP:NREP 1 RP:SCP:REP 1->147|1xm5A|3e-25|32.4|136/152|d.92.1.15| HM:SCP:REP 3->150|1tviA_|4.1e-36|45.5|132/0|d.92.1.15|1/1|Metalloproteases ("zincins"), catalytic domain| OP:NHOMO 308 OP:NHOMOORG 308 OP:PATTERN -------------------------------------------------------------------- ---1111111111--11----11111-----1-11111111111--111--------1--111----1111-111---1111-1111----------------------------------------------------1--------1---------11-1-1111--1---------------------11111111111111111111--11111111111-111111111111111111111111111111111111111111111111-11---11111111111111111111111111111111111-11111111111-11111111-1-1111111111111111111-11-11--111-1-1111-----11-11------11-------------------------1-1-1--1111--111-------------------------------------------1-----1-------------1-1----------------------------------------------1--------------------------1-1--------------------1---1-------11111--------------111---1----------------------------1---1---------------------------------------------------1111111111111111-------------------------------1111--------1-1----------------------------1---------1111111111------------------------------1------------------1------------------------111--1-111--- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---1------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 149 STR:RPRED 97.4 SQ:SECSTR ##EEEEEEEcccccccccTHHHHHHHHHHHHccccEEEEEEEEcHHHHHHHHHHHHcccccccEEEEEccccccEETTEEEcccccc#EEEEEEEHHHHHHHHHHHTccHHHHHHHHHHHHHHHHTTcccccTTcHHHHHHHHHHHHHHHHH# PSIPRED cEEEEEccccccccHHHHHHHHHHHHHHHHccccccEEEEEEEcHHHHHHHHHHHccccccccEEEccccccccccccccccccccccccEEEEEHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHccc //