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Eggerthella lenta DSM 2243 (elen0)
Gene : ACV55658.1
DDBJ      :             L-seryl-tRNA selenium transferase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  261/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
c.67.1
:492 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   266->329 2aeuA PDBj 4e-06 40.4 %
:RPS:PDB   188->395 2aeuA PDBj 1e-07 17.8 %
:RPS:SCOP  176->390 2aeuA1  c.67.1.8 * 3e-26 21.1 %
:HMM:SCOP  72->484 2aeuA1 c.67.1.8 * 8.1e-38 27.0 %
:RPS:PFM   84->389 PF03841 * SelA 5e-63 53.8 %
:HMM:PFM   84->464 PF03841 * SelA 5.7e-139 53.8 366/367  
:HMM:PFM   10->49 PF12390 * Se-cys_synth_N 3.9e-10 37.5 40/40  
:BLT:SWISS 7->463 SELA_DESBA 3e-93 50.9 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACV55658.1 GT:GENE ACV55658.1 GT:PRODUCT L-seryl-tRNA selenium transferase GT:DATABASE GIB01015CH01 GT:ORG elen0 GB:ACCESSION GIB01015CH01 GB:LOCATION 1994846..1996324 GB:FROM 1994846 GB:TO 1996324 GB:DIRECTION + GB:PRODUCT L-seryl-tRNA selenium transferase GB:NOTE KEGG: dvm:DvMF_1311 L-seryl-tRNA(sec) selenium transferase; TIGRFAM: L-seryl-tRNA selenium transferase; PFAM: L-seryl-tRNA selenium transferase; Cys/Met metabolism pyridoxal-phosphate-dependent protein GB:PROTEIN_ID ACV55658.1 GB:DB_XREF GI:257475338 InterPro:IPR000277 InterPro:IPR004534 LENGTH 492 SQ:AASEQ MANPSRTDLLRALPQVEEMLQLPEVSALLSLLPRSVLADCVREAVDETRRAVLAGACERVDVPALAESTRARAFARARPSLRRVINATGIVVHTNLGRSPLADEAVSAVSDVARGYSTLEYDTDAMARGSRHDHVERLICTLTGAEAALAVNNNAAAVMMVLHEFARGHEAVVSRGELVEIGGSFRVPDIMELSQARMVEVGTTNKTHAVDYERAIGADTSMLLKVHPSNYRVVGFAESVSARDLRPLADAENARRTASGEPGAGELLVYEDQGSGAFLNLDAFGAYAEPTVAESLQAGCDLVSFSGDKLLGGPQAGIIVGAKRFIDRLKKNPYARAMRLDKMTLAALEATLRLYLDPAIALERIPALRMLSEPAEAVRGRAERLARTLEEALPAGAARIDVVPDTARAGGGALPLCDIDSHAVRIEFSRGDAQGCETFLIARRDVPVIGRIKHDAVLLDARTVAEDELAEVAEAVRAYFDALDAGAEGSRA GT:EXON 1|1-492:0| BL:SWS:NREP 1 BL:SWS:REP 7->463|SELA_DESBA|3e-93|50.9|440/465| SEG 102->113|adeavsavsdva| SEG 147->162|aalavnnnaaavmmvl| SEG 464->476|vaedelaevaeav| BL:PDB:NREP 1 BL:PDB:REP 266->329|2aeuA|4e-06|40.4|57/366| RP:PDB:NREP 1 RP:PDB:REP 188->395|2aeuA|1e-07|17.8|174/366| RP:PFM:NREP 1 RP:PFM:REP 84->389|PF03841|5e-63|53.8|288/303|SelA| HM:PFM:NREP 2 HM:PFM:REP 84->464|PF03841|5.7e-139|53.8|366/367|SelA| HM:PFM:REP 10->49|PF12390|3.9e-10|37.5|40/40|Se-cys_synth_N| RP:SCP:NREP 1 RP:SCP:REP 176->390|2aeuA1|3e-26|21.1|180/366|c.67.1.8| HM:SCP:REP 72->484|2aeuA1|8.1e-38|27.0|355/0|c.67.1.8|1/1|PLP-dependent transferases| OP:NHOMO 262 OP:NHOMOORG 262 OP:PATTERN -------------------------------------------------------------------- -11-11---------11-------11-------111-----1111-11-------1-----1---11------------11111-----------------------------------------------------11-----11----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11--1111111-1--1---111----11--11111111-111--1-1---1-----------1-----1---------------1---1----1---------------111-1---1----------------------------------------------------------1----1-11111111111111111-1111--------------1-------------1------------1-1111111111111111111111-11111-1111111111111111111111111----11-----------111--1111--11-----------------11--11-1111111111-11-1111111111111111111--111111111111111111111111111--111111111111------------------1111111111-1--1------------11111-1--11111----------------1----------11---------------1--------------1---------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 289 STR:RPRED 58.7 SQ:SECSTR ###################################################################################################################################HHHHHHHHHHHHTccEEEEEccHHHHHHHHTTcccTTcEEEEEccccEEcHHHHHHccTHHHHHHHHTTcEEEEEccHHHHHTTccTTEEEEEEcccTTcccccHHHTccHHHHHHHHHHHTccTcccccEEEEcEEEEcTTHHHHEEEEEcTcTHHHTTcccHHHHTccEEEEETTccccccccEEEEEEHHHHHHHHHHHHTTTccccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHTTTccEEEEEEccTTTcccEEEEEEcT######################################################################## PSIPRED cccccccHHHHHcccHHHHHHccccHHHHHHccHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHccccEEEEccccEEEEEccccccccHHHHHHHHHHHcccccHHHHHHHcccccHHHHHHHHHHHHHcccEEEEEccHHHHHHHHHHHHccccEEEEcccccccccccccHHHHHHHcccEEEEEcccccccHHHHHHHcccccEEEEEEcccccccccccccccHHHHHHHHHHHcHHHHcccccccccccEEEEccccccccHHHccccccccHHHHHHccccEEEEEcccccccccccEEEEcHHHHHHHHHcccccEEcccHHHHHHHHHHHHHHccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcccccEEEEEEEccccccccccccccccEEEEEEEcccccHHHHHHHHHccccccEEEEEEccEEEEEEccccHHHHHHHHHHHHHHHHHHHcccccccc //