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Eggerthella lenta DSM 2243 (elen0)
Gene : ACV55697.1
DDBJ      :             exodeoxyribonuclease VII, large subunit
Swiss-Prot:             

Homologs  Archaea  15/68 : Bacteria  781/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
b.40.4d.218.1
:480 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   34->274 2a8lA PDBj 4e-16 15.8 %
:RPS:SCOP  42->130 1l1oB  b.40.4.3 * 2e-04 16.9 %
:RPS:SCOP  176->205 1ylqA1  d.218.1.5 * 1e-04 16.7 %
:RPS:PFM   149->440 PF02601 * Exonuc_VII_L 4e-36 42.4 %
:HMM:PFM   149->462 PF02601 * Exonuc_VII_L 3e-74 35.3 306/319  
:HMM:PFM   52->118 PF01336 * tRNA_anti 2.6e-07 23.1 65/76  
:BLT:SWISS 52->442 EX7L_ECOLU 9e-48 33.8 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACV55697.1 GT:GENE ACV55697.1 GT:PRODUCT exodeoxyribonuclease VII, large subunit GT:DATABASE GIB01015CH01 GT:ORG elen0 GB:ACCESSION GIB01015CH01 GB:LOCATION complement(2038995..2040437) GB:FROM 2038995 GB:TO 2040437 GB:DIRECTION - GB:PRODUCT exodeoxyribonuclease VII, large subunit GB:NOTE KEGG: tgr:Tgr7_1034 exodeoxyribonuclease VII; TIGRFAM: exodeoxyribonuclease VII, large subunit; PFAM: Exonuclease VII large subunit; nucleic acid binding OB-fold tRNA/helicase-type GB:PROTEIN_ID ACV55697.1 GB:DB_XREF GI:257475377 InterPro:IPR003753 InterPro:IPR004365 LENGTH 480 SQ:AASEQ MGYGEMARQDGLGAALERARAATRSEGGGSPDALSVSGAMALAKGALEGVTVRLVGEVSEVSNKPGYKAVYFTVKDQRAALPCMMWNNRFQASGVRLAVGQLVELTGRFTLYAPKGRMNFDVFSIALAGEGNLRMQVANLARKLEAEGLMAPARKRPVPAYPALVGLVTSPRGAAVHDVLRTLRRRFPLARVLVAGVAVEGSNAPAGIVEGMRAVVRAGAEVVLVVRGGGSFEDLMPFNDEGLARMIAKCPVPVVTGIGHEPDTSIADMVADLRASTPTAAAEAVSPARESLGRLFEARSSSLRASMSRALDRAGAEVRRCATRPLFCDAQLLYATEAQMLDLASDRLFRALPANLARDEASVARQRERLACALPASLDRSRTRLEHERERLASCGGALVPRFGQQAALAAARLHDLSPLAVLGRGYAIARTEDGAVVKSVEAAPPGTAVDVAVADGVLACRVEQARRVDTEIIDWEDAS GT:EXON 1|1-480:0| BL:SWS:NREP 1 BL:SWS:REP 52->442|EX7L_ECOLU|9e-48|33.8|390/458| SEG 11->22|glgaaleraraa| SEG 211->230|gmravvragaevvlvvrggg| SEG 298->314|arssslrasmsraldra| SEG 443->460|aappgtavdvavadgvla| RP:PDB:NREP 1 RP:PDB:REP 34->274|2a8lA|4e-16|15.8|228/307| RP:PFM:NREP 1 RP:PFM:REP 149->440|PF02601|4e-36|42.4|288/313|Exonuc_VII_L| HM:PFM:NREP 2 HM:PFM:REP 149->462|PF02601|3e-74|35.3|306/319|Exonuc_VII_L| HM:PFM:REP 52->118|PF01336|2.6e-07|23.1|65/76|tRNA_anti| RP:SCP:NREP 2 RP:SCP:REP 42->130|1l1oB|2e-04|16.9|83/123|b.40.4.3| RP:SCP:REP 176->205|1ylqA1|1e-04|16.7|30/90|d.218.1.5| OP:NHOMO 805 OP:NHOMOORG 798 OP:PATTERN ------------------------2---1---1-----111111111111------------------ 111-111111111111111-11111111111111111111111111111111111-11111111111111111111111111-----------1--------------1-1111111111111111111111111111111---111111-1-1111111111----111--111---1-11--------111111111111111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-111-1111111111111111111111111111111111-111111111111111111111111111111111111111111111111111111111111111--111111111111111-----111111111111111111111111111111111111111111111111121111111111111111111111111111111111111111111121111311111211111111111111111111111111111111111111111111111111111111111---1111------111111111111111-1-1111111111111111111111111111111111111111111111111111-111111111111--11111111111111111-1111-11111111----------1111111111111111111----------1111111111111111111111111111111-111111--------1-1----1---1-1------1--------1---11111111 --------------------------------------------------------------------------------------------------------------------------------------------------------------1-----------1---------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 394 STR:RPRED 82.1 SQ:SECSTR #################################ccTTccccEEEEEEETTTEEEEEEEcccccEHHHHHHHHHHHHHHcccccccEEEHHHHHHHHHHTTcccccEEEEEEETTTccETccEEEEEEEcccTTccTTcccGGGcTTTcEEEGGGEcccTTcccEEEEEEEEcHHHHHHHHTTHHHHHHHHTTcccHHHHHHHHHHHTTTTGGGTTcccccEEEEEEEEccEEEEEEEEcccEEEEEEEETEccTTccTTTccEGcEEEEEEEccEEEEEEEEccccEEEEEHHHHHTcc####HTccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccGGGccccccccHHHHHHHHHHHHHHHHHHHTTcTcccGGGGGGTTHHHHHHHHHHTTTcccHHHHHHHHHHHHHHHHHHTTcccHHHHHH################################################# DISOP:02AL 480-481| PSIPRED ccccHHHHHcccccccccccccccccccccccEEEHHHHHHHHHHHccccEEEEEEEEEcEEEcccccEEEEEEEccccEEEEEEEccHHHccccccccccEEEEEEEEEEEEcccEEEEEEEEEEEccHHHHHHHHHHHHHHHHHcccccHHHcccccccccEEEEEccccHHHHHHHHHHHHHHcccccEEEEEcccccccHHHHHHHHHHHHccccccEEEEEcccccHHHHHHcccHHHHHHHHcccccEEEEEcccccHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHcccEEEEEcccccEEccHHHcccccEEEEEEEccEEEEEEEEccccccccccccccc //