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Eggerthella lenta DSM 2243 (elen0)
Gene : ACV55747.1
DDBJ      :             protein of unknown function UPF0052 and CofD
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  445/915 : Eukaryota  6/199 : Viruses  0/175   --->[See Alignment]
c.143.1
:374 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   30->283 2o2zD PDBj 2e-40 38.3 %
:RPS:PDB   35->280 3c3eA PDBj 5e-06 15.8 %
:RPS:PDB   258->372 2bp1B PDBj 5e-04 10.8 %
:RPS:SCOP  30->361 2hzbA1  c.143.1.1 * 7e-39 34.5 %
:HMM:SCOP  30->280 2hzbA1 c.143.1.1 * 4.7e-69 44.6 %
:RPS:PFM   34->279 PF01933 * UPF0052 1e-43 43.7 %
:HMM:PFM   34->288 PF01933 * UPF0052 7.2e-71 40.9 254/301  
:BLT:SWISS 28->280 Y2473_LISMO 3e-47 39.2 %

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACV55747.1 GT:GENE ACV55747.1 GT:PRODUCT protein of unknown function UPF0052 and CofD GT:DATABASE GIB01015CH01 GT:ORG elen0 GB:ACCESSION GIB01015CH01 GB:LOCATION complement(2088038..2089162) GB:FROM 2088038 GB:TO 2089162 GB:DIRECTION - GB:PRODUCT protein of unknown function UPF0052 and CofD GB:NOTE PFAM: protein of unknown function UPF0052 and CofD; KEGG: mxa:MXAN_3230 hypothetical protein GB:PROTEIN_ID ACV55747.1 GB:DB_XREF GI:257475427 InterPro:IPR002882 InterPro:IPR010119 LENGTH 374 SQ:AASEQ MVARPFSHDPSATAAFAALRESQPVVARDERLRVVVIGGGTGAPVSIRTLLSMGLDTSAVVAMADDGGSTGILREEADVTPPGDVRKCIAAMAADPNDPLTKAFKYRFSFARNHTLGNLMLSALEDAAGSFPEAISICERLLDARGHVYPSTLDRVTLTARTRDGRSLEGQAVACHSRTALERVSLRAAHEVVPYQPALEAIREADLIVLGPGSLFTSIIPNLLVPGVVDAIRASKGSTLFVCSLADMQGETWGLTAREHVEALMDHGTRGLLDYVLVHTPVSLRPDSPATGVFTAVTGADSEHASTADLDDLVLSGRIRPVRVCYQDVQAIQAQGPVVIARNLVDPIHPTWHDPAALRDAFAGVLKLCRSRRR GT:EXON 1|1-374:0| BL:SWS:NREP 1 BL:SWS:REP 28->280|Y2473_LISMO|3e-47|39.2|250/322| BL:PDB:NREP 1 BL:PDB:REP 30->283|2o2zD|2e-40|38.3|248/304| RP:PDB:NREP 2 RP:PDB:REP 35->280|3c3eA|5e-06|15.8|241/297| RP:PDB:REP 258->372|2bp1B|5e-04|10.8|102/320| RP:PFM:NREP 1 RP:PFM:REP 34->279|PF01933|1e-43|43.7|245/283|UPF0052| HM:PFM:NREP 1 HM:PFM:REP 34->288|PF01933|7.2e-71|40.9|254/301|UPF0052| RP:SCP:NREP 1 RP:SCP:REP 30->361|2hzbA1|7e-39|34.5|304/311|c.143.1.1| HM:SCP:REP 30->280|2hzbA1|4.7e-69|44.6|249/0|c.143.1.1|1/1|CofD-like| OP:NHOMO 457 OP:NHOMOORG 451 OP:PATTERN -------------------------------------------------------------------- 1111111111111111111-111111111111111111111111-1111---111111--11111111111--------111111111------------------------------------------------22222---1111111111111111111111111111111111111111111111-111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-1-11-11--1-11111111111111------------------------------------------------------------1-----------------------------------------------------------------------------------------------------------1--------------------------------------------------------11111111---------------------------11----11--11211111111111111111-------------11111111111111111-1111111111111111111111111111111111111111111111111111-111111111111------------------111111------111---------------------------------------11111111111111------------------------------------------------------------1111111111--- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---1--------1111- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 330 STR:RPRED 88.2 SQ:SECSTR #############################cccEEEEEEcccHHHHHHHTTTccGGGcEEEEccTTcEEETTEEEcHHHHHHHHHHHHHHTTcccTTTTcccTTcccHHHHHHHTTccccccccHHHHHccHHHHHHHHHHHHTcccEEEEccccccEEEEEETTEEEHHHHHTTTTTcccEEEEEEETTTTccccHHHHHHHHHccEEEEccccTTTTHHEEEEccccTTccccTTHHHHHHTTccccHHHHHHGGGTccEEEEEcTTcccHHHHHTTTcEccccTTccHHHHHHH#############HHHHHHTTcEEEEEEEcccHHHHHHHHHHHHHHTcccEEEEEEEccTTccGGGTTHHHHHHHH## PSIPRED cccccccccccHHHHHHHHcccccccccccccEEEEEEccccHHHHHHHHHcccccEEEEEEccccccHHHHHHHHHccccccHHHHHHHHHcccccHHHHHHHHHHHcccccccHHHHHHHHHHHHcccHHHHHHHHHHHHccccEEEEcccccEEEEEEEccccEEEEEEEEcccccccEEEEEEccccccccHHHHHHHHHccEEEEccccHHHHHccccccHHHHHHHHHccccEEEEccccccccccccccHHHHHHHHHHHcccccccEEEEcccccccccccHHHHHHHHHHccccccHHHHHHHHHHHcEEEcccEEEEccHHHHHcccEEEHHHHHcccccccccHHHHHHHHHHHHHHHHHccc //