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Eggerthella lenta DSM 2243 (elen0)
Gene : ACV55774.1
DDBJ      :             ribosome-binding factor A
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  206/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.52.7
:145 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   2->102 1kkgA PDBj 5e-13 40.6 %
:RPS:PDB   1->115 2e7gA PDBj 2e-17 16.5 %
:RPS:SCOP  7->100 1josA  d.52.7.1 * 7e-23 37.2 %
:HMM:SCOP  1->102 1kkgA_ d.52.7.1 * 3.1e-23 42.2 %
:RPS:PFM   9->103 PF02033 * RBFA 1e-11 38.9 %
:HMM:PFM   7->105 PF02033 * RBFA 5.2e-27 38.4 99/104  
:BLT:SWISS 9->135 RBFA_COLP3 7e-17 33.9 %
:PROS 73->94|PS01319|RBFA

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACV55774.1 GT:GENE ACV55774.1 GT:PRODUCT ribosome-binding factor A GT:DATABASE GIB01015CH01 GT:ORG elen0 GB:ACCESSION GIB01015CH01 GB:LOCATION complement(2122983..2123420) GB:FROM 2122983 GB:TO 2123420 GB:DIRECTION - GB:PRODUCT ribosome-binding factor A GB:NOTE TIGRFAM: ribosome-binding factor A; PFAM: ribosome-binding factor A; KEGG: cps:CPS_2204 ribosome-binding factor A GB:PROTEIN_ID ACV55774.1 GB:DB_XREF GI:257475454 InterPro:IPR000238 LENGTH 145 SQ:AASEQ MKQSSSNRKVNEQAREVIAGILLFEISDPRLELVTITGCEVSYDRSVCNVFYTTEPDRYEDVAAAFQKASGRIRSLMARKLSWRIAPELRFLLDKSVDEAERIASALERDAARNKVAAPTDSDVPADADIMADREAQAQQASEGE GT:EXON 1|1-145:0| BL:SWS:NREP 1 BL:SWS:REP 9->135|RBFA_COLP3|7e-17|33.9|127/142| PROS 73->94|PS01319|RBFA|PDOC01023| BL:PDB:NREP 1 BL:PDB:REP 2->102|1kkgA|5e-13|40.6|101/108| RP:PDB:NREP 1 RP:PDB:REP 1->115|2e7gA|2e-17|16.5|115/129| RP:PFM:NREP 1 RP:PFM:REP 9->103|PF02033|1e-11|38.9|95/104|RBFA| HM:PFM:NREP 1 HM:PFM:REP 7->105|PF02033|5.2e-27|38.4|99/104|RBFA| GO:PFM:NREP 1 GO:PFM GO:0006364|"GO:rRNA processing"|PF02033|IPR000238| RP:SCP:NREP 1 RP:SCP:REP 7->100|1josA|7e-23|37.2|94/100|d.52.7.1| HM:SCP:REP 1->102|1kkgA_|3.1e-23|42.2|102/0|d.52.7.1|1/1|Ribosome-binding factor A, RbfA| OP:NHOMO 206 OP:NHOMOORG 206 OP:PATTERN -------------------------------------------------------------------- -----1------1-----------------------------1------11---------1-1---------------1111---------------------------------------------------------11--------------------------------------------------1---------------------1---------11-------1---------------1--------11---------11-11------------------------------------------------------------------------------11-1----111---1----1-----------------------------------------------------------------------------------------------------------------------------------------1------------------1---------------------11-1-11-1-------11111--1----1---1--------11--------------------------------------111-1-111111----111------11--1-------------11111111111111111-1111111111111111111111111111111111111111111111111111-111111111111--1111111-----11111111111111-1111----------11111111111111111111111111111---------1--11----------------1-------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 115 STR:RPRED 79.3 SQ:SECSTR cHHHHHHHHHHHHHHHHHHHHTTcTTTcHHHHTccEEEEEEcTTcccEEEEEcccccHHHHHHHHHHHTHHHHHHHHHTcTTccccccEEEEETTcccccccccccccccccccc############################## DISOP:02AL 145-146| PSIPRED ccccHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEEcccccEEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHccEEEccEEEEEEccHHHHHHHHHHHHHHHHHHcccccccHHHccHHHHHHHHHHHHcccccccc //