[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Eggerthella lenta DSM 2243 (elen0)
Gene : ACV55893.1
DDBJ      :             trigger factor
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  753/915 : Eukaryota  3/199 : Viruses  0/175   --->[See Alignment]
a.223.1d.241.2d.26.1
:501 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   6->322 1t11A PDBj 2e-21 27.3 %
:RPS:PDB   17->117 2d3o1 PDBj 7e-19 27.3 %
:RPS:PDB   136->231 3chxA PDBj 2e-05 4.2 %
:RPS:SCOP  8->123 1omsA  d.241.2.1 * 3e-22 28.9 %
:RPS:SCOP  121->231 1jvwA  d.26.1.1 * 5e-07 11.0 %
:RPS:SCOP  265->444 1w26A1  a.223.1.1 * 4e-11 17.6 %
:HMM:SCOP  7->137 1t11A2 d.241.2.1 * 5.7e-32 30.2 %
:HMM:SCOP  94->258 1fd9A_ d.26.1.1 * 5.9e-13 21.4 %
:HMM:SCOP  263->453 1w26A1 a.223.1.1 * 3.5e-25 27.0 %
:RPS:PFM   7->152 PF05697 * Trigger_N 2e-20 37.2 %
:RPS:PFM   277->429 PF05698 * Trigger_C 8e-12 30.7 %
:HMM:PFM   8->153 PF05697 * Trigger_N 1.9e-38 32.6 144/145  
:HMM:PFM   276->433 PF05698 * Trigger_C 3.4e-27 25.9 158/162  
:HMM:PFM   166->229 PF00254 * FKBP_C 7.3e-05 21.9 64/96  
:HMM:PFM   425->490 PF07382 * HC2 5.2e-05 48.5 66/194  
:BLT:SWISS 7->375 TIG_BACSK 4e-41 29.9 %
:PROS 1->122|PS00430|TONB_DEPENDENT_REC_1
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACV55893.1 GT:GENE ACV55893.1 GT:PRODUCT trigger factor GT:DATABASE GIB01015CH01 GT:ORG elen0 GB:ACCESSION GIB01015CH01 GB:LOCATION complement(2260414..2261919) GB:FROM 2260414 GB:TO 2261919 GB:DIRECTION - GB:PRODUCT trigger factor GB:NOTE TIGRFAM: trigger factor; PFAM: trigger factor domain; trigger factor domain protein; peptidylprolyl isomerase FKBP-type; KEGG: bha:BH3053 trigger factor GB:PROTEIN_ID ACV55893.1 GB:DB_XREF GI:257475573 InterPro:IPR001179 InterPro:IPR005215 InterPro:IPR008880 InterPro:IPR008881 InterPro:IPR010916 LENGTH 501 SQ:AASEQ MMEDSYVETKVEALEDNRTKVTVTVDAADIDARIKKTYKDFANKYNFPGFRKGKAPRPIIDNALGAEAVRATVTDDVVNGTYPLAIDDCDLYPIAKPEFDETDLVEAGKPYTFSFTVTVKPEIEISSYEPVEIELPAEGTTDAEIDEQIDALREHYYSFEDASAATKVKEDSYIDLAMKATDDKGEEIPSLTTENRPYGLGANLFPAEFDEQLVGLKKGQTATFTLDMPADPPIMLSALAGKTEKINFEVEVKVVKKKIVPEVNDEWAKEQMGFESVEDLRARIAESVTSQKADMMPRLKENACLYALAERVEGDVPEAMLEDAEASLIQDFFQQLQSQGMTFDVYLAQQGITPDQFKEDVKKQAEDMSKQDLALDAWARHFGMEATAEEVTEEFVKSGVEDPAALEAEWRSNGQLHMVRQGVIRTKAVKDIMDKAVVTELDLSKKKDEEKKPAKKAAAKKTAKKDEAAGDEPAKKPAKKAAPKKAAKKDEDVEAKADDAE GT:EXON 1|1-501:0| BL:SWS:NREP 1 BL:SWS:REP 7->375|TIG_BACSK|4e-41|29.9|355/434| PROS 1->122|PS00430|TONB_DEPENDENT_REC_1|PDOC00354| SEG 244->264|ekinfevevkvvkkkivpevn| SEG 385->396|eataeevteefv| SEG 445->500|kkkdeekkpakkaaakktakkdeaagdepakkpakkaapkkaakkdedveakadda| BL:PDB:NREP 1 BL:PDB:REP 6->322|1t11A|2e-21|27.3|304/376| RP:PDB:NREP 2 RP:PDB:REP 17->117|2d3o1|7e-19|27.3|99/100| RP:PDB:REP 136->231|3chxA|2e-05|4.2|96/362| RP:PFM:NREP 2 RP:PFM:REP 7->152|PF05697|2e-20|37.2|145/146|Trigger_N| RP:PFM:REP 277->429|PF05698|8e-12|30.7|153/161|Trigger_C| HM:PFM:NREP 4 HM:PFM:REP 8->153|PF05697|1.9e-38|32.6|144/145|Trigger_N| HM:PFM:REP 276->433|PF05698|3.4e-27|25.9|158/162|Trigger_C| HM:PFM:REP 166->229|PF00254|7.3e-05|21.9|64/96|FKBP_C| HM:PFM:REP 425->490|PF07382|5.2e-05|48.5|66/194|HC2| GO:PFM:NREP 4 GO:PFM GO:0006457|"GO:protein folding"|PF05697|IPR008881| GO:PFM GO:0015031|"GO:protein transport"|PF05697|IPR008881| GO:PFM GO:0006457|"GO:protein folding"|PF05698|IPR008880| GO:PFM GO:0015031|"GO:protein transport"|PF05698|IPR008880| RP:SCP:NREP 3 RP:SCP:REP 8->123|1omsA|3e-22|28.9|114/115|d.241.2.1| RP:SCP:REP 121->231|1jvwA|5e-07|11.0|109/160|d.26.1.1| RP:SCP:REP 265->444|1w26A1|4e-11|17.6|170/185|a.223.1.1| HM:SCP:REP 7->137|1t11A2|5.7e-32|30.2|129/129|d.241.2.1|1/1|Trigger factor ribosome-binding domain| HM:SCP:REP 94->258|1fd9A_|5.9e-13|21.4|159/204|d.26.1.1|1/1|FKBP-like| HM:SCP:REP 263->453|1w26A1|3.5e-25|27.0|178/0|a.223.1.1|1/1|Triger factor/SurA peptide-binding domain-like| OP:NHOMO 761 OP:NHOMOORG 756 OP:PATTERN -------------------------------------------------------------------- 111-111111111111111-111111111111111111111111111111111111111111111111111111111111221-----------------------------------------------1--------111111111111111111111-111111111111--1111--111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111122111111111111111-11111-11111111111111111111111111111-11111111111-111111111111111111111111111111111111111-111--1---------111111111-111-1-11111111111111111111111111111111111111111111-111111111111111111111111111111111111111111111111111111111111111111----------------1--1--1-11111-11111111111111111111111111--11111------11111111111111111-1111111111111111111111111111111111111111111111111111-111111111111--11111111111-11111111111111111111111111111111111111111111111111111111111111111111111111-1-11-------111--1111111-1111-111111--------------------------------111 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------1--1---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 324 STR:RPRED 64.7 SQ:SECSTR #####ccEEEEEEccTccEEEEEcccGGGTHHHHHHHHHHHHTTcccTTccTTccccTTHHHHTTTTccHHHHHHHHHHHHHHHHHHHccccccccEEccccccccccccccEEEEEEcccccccTTcTTcEEEccccccccccccccccccccccccccEcccEEEEccccccccccccccccTTccccccTTccTTccccccccTTccccccEEEEccHHHHTTcGGGGTTcccTTTcccEEEEEEcccEEEEEEEEcccccTGGGGGcTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTTT#cTTccccccEEEcHHHHHHHHHHHHH########################################################################################################################################################################### PSIPRED ccccccEEEEEEEccccEEEEEEEEcHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccEEcccccccEEEEEEEEEEccccccccccccEEEEEcccccHHHHHHHHHHHHHHcccEEEccccccccccEEEEEEEEEEEEccccccccccccEEEEEccccccHHHHHHccccccccEEEEEEEcccccccccHHccccccEEEEEEEEEEEEEcccccccHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHcccHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHcEEEEccccHHHHccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccc //