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Eggerthella lenta DSM 2243 (elen0)
Gene : ACV55898.1
DDBJ      :             protein of unknown function DUF88
Swiss-Prot:             

Homologs  Archaea  1/68 : Bacteria  160/915 : Eukaryota  16/199 : Viruses  0/175   --->[See Alignment]
:552 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   10->131 2c3aA PDBj 2e-04 10.2 %
:RPS:PFM   12->139 PF01936 * DUF88 3e-10 29.9 %
:HMM:PFM   10->144 PF01936 * DUF88 3.3e-31 29.1 134/146  
:BLT:SWISS 4->126 Y482_METJA 2e-07 31.3 %
:BLT:SWISS 169->340 YH57_SCHPO 5e-04 26.1 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACV55898.1 GT:GENE ACV55898.1 GT:PRODUCT protein of unknown function DUF88 GT:DATABASE GIB01015CH01 GT:ORG elen0 GB:ACCESSION GIB01015CH01 GB:LOCATION complement(2265914..2267572) GB:FROM 2265914 GB:TO 2267572 GB:DIRECTION - GB:PRODUCT protein of unknown function DUF88 GB:NOTE PFAM: protein of unknown function DUF88; KEGG: rme:Rmet_3395 hypothetical protein GB:PROTEIN_ID ACV55898.1 GB:DB_XREF GI:257475578 InterPro:IPR002790 LENGTH 552 SQ:AASEQ MDIKQSSEKRFALLIDADNVSAKYIKPITDELSKYGTVTYKRIYGDWTLTLHAKWKDALLENSITPIQQFGYTQGKNATDSAMIIDAMDILYTRSVEGFCIVSSDSDFTRLASRIRESGLTVIGMGEKKTPTPFRKACDIFTTLELLLGDTGGKSGGRNRNRHDQGSSSNGQGAGTTTMSKDEIEQAVVNIITDNQNNGKSTGLGEVGSRLLKRYPDFDVRSYGTNLLSKLLDEFASVQIIKDGSSVAVVLAEGANAPKDASPEAEQAPETKQADDVKDAPVAESEGSTDAQGAAEAKPVEKKPASRRQPRRRKDQVAAQQGSEATEEKPVQEPELSAEPAGEQHDRLAEPVVEAEPAEQPPSDNRPGRAARMRAAASRSRGSEGRKQAGKKQTEKGERSDGEVPAQAAAPTEEQKPAAKPKRKPARAKAPKAEQPVAEATATQEEPVGEAPKRESEAPAKRAPKRPAKATAKAVAEGAAAPSDPEAFIRQTVAAAEPEGIALSVLGKRVRGKFRTFKLRDLGYAQFRPYLDDLDGIKVEQRDGQSYARLDR GT:EXON 1|1-552:0| BL:SWS:NREP 2 BL:SWS:REP 4->126|Y482_METJA|2e-07|31.3|115/240| BL:SWS:REP 169->340|YH57_SCHPO|5e-04|26.1|165/100| SEG 142->153|ttlelllgdtgg| SEG 294->305|aaeakpvekkpa| SEG 349->362|aepvveaepaeqpp| SEG 366->386|rpgraarmraaasrsrgsegr| SEG 416->433|kpaakpkrkparakapka| SEG 458->482|apakrapkrpakatakavaegaaap| RP:PDB:NREP 1 RP:PDB:REP 10->131|2c3aA|2e-04|10.2|118/252| RP:PFM:NREP 1 RP:PFM:REP 12->139|PF01936|3e-10|29.9|127/143|DUF88| HM:PFM:NREP 1 HM:PFM:REP 10->144|PF01936|3.3e-31|29.1|134/146|DUF88| OP:NHOMO 189 OP:NHOMOORG 177 OP:PATTERN -------------------------------------------------1------------------ ----1----------------1----------1----------1---1---1----1-----1---------------1111--------12-1-----1-1-1-11------------------111111111-12----------1--111-----------1---------------------------------------------------------------------------------------------------------------------------------------------------------------1-------------1-11----------11--11---------------1-1-----------11111-1---1----------1-------------1-------1--------11-1212-1-----------------------------------------------111------11111111----11111111-11111121-----11111111---11211-11--------111112--2--------11-----------11111-------1111111----------1--1----21-------------1-1---1--11--------1--------------------------------------------------------------------------------------------1-------1--1--------1----------------1------------1----1--1-------------1----------1111212111----------------------111------------------------------------11 ---------------1-111---1111------------------------11111---------------------------------------------------------------------------------------------------------------------1---------------1--------1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 117 STR:RPRED 21.2 SQ:SECSTR #########cEEEEcccccHHHHHHTccTTGGGccEEEEEEEEEEEEcTTccTTcccE####EEccEEcccTTTEEEc#cccEEEEcccGGGcEEEEEEEEETTEEEEEEEEEEEccccccTTcccccccG##################################################################################################################################################################################################################################################################################################################################################################################################################################### DISOP:02AL 552-553| PSIPRED ccccccccccEEEEEEHHHccHHHHHHHHHHHHHcccEEEEEEEEccccccHHHHHHHHHHcccccEEEccccccccHHHHHHHHHHHHHHHcccccEEEEEcccccHHHHHHHHHHcccEEEEEcccccHHHHHHHccEEEEEEcccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHcccccEEEHHHHHHHHHHcccccccccccccHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHcccccccccccHHHHHccc //