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Eggerthella lenta DSM 2243 (elen0)
Gene : ACV55934.1
DDBJ      :             Excinuclease ABC C subunit domain protein
Swiss-Prot:             

Homologs  Archaea  8/68 : Bacteria  308/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.226.1
:121 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   12->86 1zg2A PDBj 4e-23 58.7 %
:RPS:SCOP  12->88 1ln0A  d.226.1.1 * 7e-14 11.7 %
:HMM:SCOP  9->81 1mk0A_ d.226.1.1 * 4.1e-10 28.8 %
:HMM:PFM   12->80 PF01541 * GIY-YIG 1.8e-11 24.6 69/80  
:BLT:SWISS 12->86 Y048_BACHD 1e-22 58.7 %
:BLT:SWISS 57->117 GDF15_HUMAN 6e-04 31.1 %

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACV55934.1 GT:GENE ACV55934.1 GT:PRODUCT Excinuclease ABC C subunit domain protein GT:DATABASE GIB01015CH01 GT:ORG elen0 GB:ACCESSION GIB01015CH01 GB:LOCATION complement(2308060..2308425) GB:FROM 2308060 GB:TO 2308425 GB:DIRECTION - GB:PRODUCT Excinuclease ABC C subunit domain protein GB:NOTE PFAM: Excinuclease ABC C subunit domain protein; KEGG: bha:BH0048 hypothetical protein GB:PROTEIN_ID ACV55934.1 GB:DB_XREF GI:257475614 InterPro:IPR000305 LENGTH 121 SQ:AASEQ MDPRAENDPSFYLYVLECADGTWYTGYTVDVAERVRAHNAGAGAKYTRSRLPVRLLAQAAYATKHEAMSAEYRFKRLMRRQKERLVRRAAREPFEQVLSDLMPAAGVREDTEGVDVGGEAR GT:EXON 1|1-121:0| BL:SWS:NREP 2 BL:SWS:REP 12->86|Y048_BACHD|1e-22|58.7|75/94| BL:SWS:REP 57->117|GDF15_HUMAN|6e-04|31.1|61/308| BL:PDB:NREP 1 BL:PDB:REP 12->86|1zg2A|4e-23|58.7|75/94| HM:PFM:NREP 1 HM:PFM:REP 12->80|PF01541|1.8e-11|24.6|69/80|GIY-YIG| RP:SCP:NREP 1 RP:SCP:REP 12->88|1ln0A|7e-14|11.7|77/92|d.226.1.1| HM:SCP:REP 9->81|1mk0A_|4.1e-10|28.8|73/97|d.226.1.1|1/1|GIY-YIG endonuclease| OP:NHOMO 317 OP:NHOMOORG 316 OP:PATTERN ------------------------11111111------------------------------------ -------------------------------------------------------------------------------111-------------------1------1-------------------------------------1----------------1-----------------------------111111-111-11111111111111---11111111111--111111111111-11111111111111111-1111111111111111111111111111111111111111111111111111111111-11-1111111111111111111---11--1--1111-111-----------------------1------1-------------------------1--------------------------------------------------------------------------1--2------11111111111111111-111111-11111--------------11---111-------------1--1-1----11----11111-1---11---1-------------------------1----1--111---11-11-111111-1--111-------------1111-111111111111-1111111111111111111----11--1111111111111111-11111111----------------1-----11-1--1-------------------------------------------------------1--------------1111111111-------------------------------------------------------------1- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 82 STR:RPRED 67.8 SQ:SECSTR #####cccccEEEEEEEcTTccEEEEEEccHHHHHHHHHHHTTccccccccccEEEEEEEEccHHHHHHHHHHHHHccHHHHHHHHH################################## DISOP:02AL 120-122| PSIPRED cccccccccccEEEEEEcccccEEEEEEccHHHHHHHHHcccccccccccccEEEEEEEEcccHHHHHHHHHHHHcccHHHHHHHHHHcccccHHHHHHccccccccHHHHHHHHcccccc //