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Eggerthella lenta DSM 2243 (elen0)
Gene : ACV55939.1
DDBJ      :             CRISPR-associated protein Cas4
Swiss-Prot:             

Homologs  Archaea  4/68 : Bacteria  94/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.52.1
:220 amino acids
:PSIPRED
:RPS:SCOP  11->144 1w36B3  c.52.1.24 * 3e-07 15.1 %
:RPS:PFM   18->198 PF01930 * Cas_Cas4 1e-22 46.7 %
:HMM:PFM   11->199 PF01930 * Cas_Cas4 5.4e-35 30.8 156/162  

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACV55939.1 GT:GENE ACV55939.1 GT:PRODUCT CRISPR-associated protein Cas4 GT:DATABASE GIB01015CH01 GT:ORG elen0 GB:ACCESSION GIB01015CH01 GB:LOCATION complement(2313873..2314535) GB:FROM 2313873 GB:TO 2314535 GB:DIRECTION - GB:PRODUCT CRISPR-associated protein Cas4 GB:NOTE TIGRFAM: CRISPR-associated protein Cas4; PFAM: protein of unknown function DUF83; KEGG: sat:SYN_02474 exonuclease N GB:PROTEIN_ID ACV55939.1 GB:DB_XREF GI:257475619 InterPro:IPR002785 InterPro:IPR013343 LENGTH 220 SQ:AASEQ MYDEDEFLALSGIQHFAFCRRQWALIHIEQAWADNVLTAQGELMHKRAHDEELRERRGDTLVVRGLSVHSRALGLSGKCDVVEFRKNSHGHTLTGEDGLWRAVPVEYKRGSSKANDADRLQLCAQALCLEEMLGADVPIGFLYYGETRSREKVEFDESLCALVGSMVEEMHALYRRRHTPRVKPFSACRSCSLNDLCLPRAINRATVGEYVAKRLFEEEL GT:EXON 1|1-220:0| RP:PFM:NREP 1 RP:PFM:REP 18->198|PF01930|1e-22|46.7|152/158|Cas_Cas4| HM:PFM:NREP 1 HM:PFM:REP 11->199|PF01930|5.4e-35|30.8|156/162|Cas_Cas4| RP:SCP:NREP 1 RP:SCP:REP 11->144|1w36B3|3e-07|15.1|119/276|c.52.1.24| OP:NHOMO 105 OP:NHOMOORG 98 OP:PATTERN -------------------------------1-------------1--1--1---------------- 1-1---------------------------------------1-----------------------1----1--------1------------1--------------------------------11-1-111------1---1---11121----------11--111--------------1-21---1-----------------11------------1------------------------------------1-1--------------------1-1-1------------1----111111-1-----------1-------------1--------------1---12211---1-------------------------1-----------------------1-----------------------------1------------11----1-------------------------------------------------------------------------1-------1------1--1-12------1-1-----------1-111--1--111------1-1----------------------------------------------------------------1------------------------------------------------------------------------------------------------------1-1-----111-------------------11-------------1-----------------------------1----111------1-----12------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PSIPRED cccccccccHHHHHHHHHHHHHHHHHHHHcccccHHHHHccHHHHHHHccHHHHHHHccEEEEEEEEEEccccccEEEEEEEEEcccccccccccccccccEEEEEEEcccccccHHHHHHHHHHHHHHHHHHcccccEEEEEEcccccEEEEEccHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHcccHHHHHcccHHHHHHHHHccccc //