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Eggerthella lenta DSM 2243 (elen0)
Gene : ACV56021.1
DDBJ      :             zinc finger CDGSH-type domain protein
Swiss-Prot:             

Homologs  Archaea  8/68 : Bacteria  10/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:246 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   64->85 PF09360 * zf-CDGSH 2e-06 68.2 %
:RPS:PFM   212->235 PF09360 * zf-CDGSH 2e-06 58.3 %
:HMM:PFM   30->85 PF09360 * zf-CDGSH 4.7e-18 64.7 34/38  
:HMM:PFM   193->235 PF09360 * zf-CDGSH 5.6e-17 63.6 33/38  
:HMM:PFM   110->165 PF06902 * DUF1271 3.7e-08 28.6 56/64  
:BLT:SWISS 50->97 CISD3_MOUSE 1e-04 45.8 %
:REPEAT 2|29->90|191->240

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACV56021.1 GT:GENE ACV56021.1 GT:PRODUCT zinc finger CDGSH-type domain protein GT:DATABASE GIB01015CH01 GT:ORG elen0 GB:ACCESSION GIB01015CH01 GB:LOCATION 2423174..2423914 GB:FROM 2423174 GB:TO 2423914 GB:DIRECTION + GB:PRODUCT zinc finger CDGSH-type domain protein GB:NOTE SMART: zinc finger CDGSH-type domain protein; KEGG: jan:Jann_1270 hypothetical protein GB:PROTEIN_ID ACV56021.1 GB:DB_XREF GI:257475701 InterPro:IPR006622 LENGTH 246 SQ:AASEQ MTTPSATAQSQPEAAVDAPVDRMSITISLNGPYLVNGGVPLTQEVITPVGGHREYRTARAFPHQETYALCRCGQTSTPPFCDGSHVAAGFHGAETASRASFEERADIYPGPGVTLYDDNRCAFARFCHREDGDVWTLTELSGDERLKREAVQESTDCPAGRLVHVDSETGAMYEPELGPSIALLEDPEEGVSGPLYVRGGIPLVGADGTEYELRNRYALCRCGASRNKPFCDAMHVTVGYEDGLNG GT:EXON 1|1-246:0| BL:SWS:NREP 1 BL:SWS:REP 50->97|CISD3_MOUSE|1e-04|45.8|48/137| NREPEAT 1 REPEAT 2|29->90|191->240| RP:PFM:NREP 2 RP:PFM:REP 64->85|PF09360|2e-06|68.2|22/35|zf-CDGSH| RP:PFM:REP 212->235|PF09360|2e-06|58.3|24/35|zf-CDGSH| HM:PFM:NREP 3 HM:PFM:REP 30->85|PF09360|4.7e-18|64.7|34/38|zf-CDGSH| HM:PFM:REP 193->235|PF09360|5.6e-17|63.6|33/38|zf-CDGSH| HM:PFM:REP 110->165|PF06902|3.7e-08|28.6|56/64|DUF1271| GO:PFM:NREP 4 GO:PFM GO:0043231|"GO:intracellular membrane-bounded organelle"|PF09360|IPR018967| GO:PFM GO:0051537|"GO:2 iron, 2 sulfur cluster binding"|PF09360|IPR018967| GO:PFM GO:0043231|"GO:intracellular membrane-bounded organelle"|PF09360|IPR018967| GO:PFM GO:0051537|"GO:2 iron, 2 sulfur cluster binding"|PF09360|IPR018967| OP:NHOMO 25 OP:NHOMOORG 18 OP:PATTERN ----------------------------------1-------114----2221--------------- ----1---------------------------------------------------------------------------1-----11----------------1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-------------------------------11----------------------------------------------------------------------------------1--------------------------------------------------------------------------------------------------------------------------------------------1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 246-247| PSIPRED ccccccccccccHHHHcccccccEEEEEccccEEEEcccccEEEEEcccccccEEcccEEccccccEEEEEccccccccccccccEEEccccccccccccHHccccEEEcccEEEEEcccccEEEEEEcccccEEEEcccccccccHHHHHHHHHccccccEEEEEcccccEEccccccEEEEEEcccccccccEEEEEEEEEEcccccEEcccccEEEEEcccccccccccccccEEEEcccccc //