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Eggerthella lenta DSM 2243 (elen0)
Gene : ACV56043.1
DDBJ      :             transcriptional regulator, MerR family
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  191/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.6.1
:256 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   9->107 1r8dA PDBj 1e-09 32.3 %
:RPS:PDB   6->148 3d70A PDBj 4e-19 23.4 %
:RPS:SCOP  8->100 1jbgA  a.6.1.3 * 5e-17 29.0 %
:HMM:SCOP  6->112 1jbgA_ a.6.1.3 * 7.9e-25 39.0 %
:RPS:PFM   8->34 PF00376 * MerR 4e-06 55.6 %
:HMM:PFM   8->45 PF00376 * MerR 2.3e-15 42.1 38/38  
:HMM:PFM   53->109 PF09278 * MerR-DNA-bind 3.6e-07 33.3 57/65  
:HMM:PFM   167->201 PF07739 * TipAS 0.00015 34.3 35/122  
:BLT:SWISS 7->110 HMRR2_RHIME 4e-11 32.7 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACV56043.1 GT:GENE ACV56043.1 GT:PRODUCT transcriptional regulator, MerR family GT:DATABASE GIB01015CH01 GT:ORG elen0 GB:ACCESSION GIB01015CH01 GB:LOCATION complement(2448162..2448932) GB:FROM 2448162 GB:TO 2448932 GB:DIRECTION - GB:PRODUCT transcriptional regulator, MerR family GB:NOTE PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: kpn:KPN_02240 putative albicidin resistance protein GB:PROTEIN_ID ACV56043.1 GB:DB_XREF GI:257475723 InterPro:IPR000551 LENGTH 256 SQ:AASEQ MTDRNYLTIGELARRAGVTVRTIQYYDQQGLLSPSAKGPQNQRLYTDDNVKDLYRILTLKYLGLSLAQIKSDAALYRESAALQELADEQMDAIEEQFQSLFKRMTTLRSLHDESLAESSVNWEAMADTIERCQGESQFFWRLTCIRDDAPAAEEAVEEQVARGESVSKWHELIADTIRLMPAGEPVDSERNRELAKRYLDLDMEQDTARTEQNFILMENIAPHAGGDGSFDELRQAVFDHLEAIVASYRSHPDPAD GT:EXON 1|1-256:0| BL:SWS:NREP 1 BL:SWS:REP 7->110|HMRR2_RHIME|4e-11|32.7|104/147| SEG 149->164|apaaeeaveeqvarge| BL:PDB:NREP 1 BL:PDB:REP 9->107|1r8dA|1e-09|32.3|99/109| RP:PDB:NREP 1 RP:PDB:REP 6->148|3d70A|4e-19|23.4|141/276| RP:PFM:NREP 1 RP:PFM:REP 8->34|PF00376|4e-06|55.6|27/37|MerR| HM:PFM:NREP 3 HM:PFM:REP 8->45|PF00376|2.3e-15|42.1|38/38|MerR| HM:PFM:REP 53->109|PF09278|3.6e-07|33.3|57/65|MerR-DNA-bind| HM:PFM:REP 167->201|PF07739|0.00015|34.3|35/122|TipAS| GO:PFM:NREP 2 GO:PFM GO:0003700|"GO:transcription factor activity"|PF00376|IPR000551| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00376|IPR000551| RP:SCP:NREP 1 RP:SCP:REP 8->100|1jbgA|5e-17|29.0|93/106|a.6.1.3| HM:SCP:REP 6->112|1jbgA_|7.9e-25|39.0|105/106|a.6.1.3|1/1|Putative DNA-binding domain| OP:NHOMO 241 OP:NHOMOORG 191 OP:PATTERN -------------------------------------------------------------------- -1------1121-2-------1--12-----11111-1---1111--2-------------1--11--2-1----1----1---------------------------------------------------------1-------1-1-------1-----1---1------------------1------1-1111122311311412122--1121---1--------23------------------1--11-----112---------------1111111-1------------1111-11111111---1---------111111111111--11----11---11---1--------1---------------------------2-------------------------21---1----1--21-------1---------------------------------------------------------------111111-1---111-221111237------111---11-------1-----1---------1-----------------------1-21-1111-1-------------------------------1-41-2---1----------3----2--------2-------1-----------------------------------11----------------------1------------------------------1321-111----1-1-----------112---1-2----1-1--1---1111-----------111------111------1-------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 145 STR:RPRED 56.6 SQ:SECSTR ###cccEEHHHHHHHHTccHHHHHHHHHTTcccccEEcTTccEEEcGGGGGHHHHHHHHHHHTccHHHHHHHHHTTccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTccccccEEEEEEccEEEEEEEcTTccTTT############################################################################################################ DISOP:02AL 256-257| PSIPRED ccccccccHHHHHHHHcccHHHHHHHHHHcccccccccccccEEccHHHHHHHHHHHHHHHccccHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHccccccc //