[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Eggerthella lenta DSM 2243 (elen0)
Gene : ACV56190.1
DDBJ      :             diguanylate cyclase/phosphodiesterase
Swiss-Prot:             

Homologs  Archaea  1/68 : Bacteria  567/915 : Eukaryota  5/199 : Viruses  0/175   --->[See Alignment]
c.1.33c.94.1d.58.29
:981 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   49->193 3h7mA PDBj 2e-08 27.0 %
:BLT:PDB   729->943 2r6oA PDBj 3e-30 38.4 %
:RPS:PDB   49->259 3b6wA PDBj 6e-16 13.2 %
:RPS:PDB   278->473 3delB PDBj 4e-12 14.6 %
:RPS:PDB   534->645 3btaA PDBj 3e-13 4.5 %
:RPS:PDB   727->980 2basA PDBj 2e-45 17.2 %
:RPS:SCOP  56->256 1ii5A  c.94.1.1 * 3e-16 19.5 %
:RPS:SCOP  274->464 1ii5A  c.94.1.1 * 8e-11 15.8 %
:RPS:SCOP  562->743 1azsA  d.58.29.1 * 5e-11 5.6 %
:RPS:SCOP  729->962 2basA1  c.1.33.1 * 5e-52 20.3 %
:HMM:SCOP  2->262 1pb7A_ c.94.1.1 * 1.2e-25 27.1 %
:HMM:SCOP  274->488 1ii5A_ c.94.1.1 * 5.4e-24 26.1 %
:HMM:SCOP  548->699 1w25A3 d.58.29.2 * 9.8e-16 23.0 %
:HMM:SCOP  723->964 2basA1 c.1.33.1 * 5.4e-72 42.2 %
:RPS:PFM   53->255 PF00497 * SBP_bac_3 1e-11 28.9 %
:RPS:PFM   277->347 PF09614 * Cas_Csy2 5e-04 35.2 %
:RPS:PFM   543->698 PF00990 * GGDEF 8e-07 26.3 %
:RPS:PFM   729->960 PF00563 * EAL 5e-49 41.7 %
:HMM:PFM   726->960 PF00563 * EAL 1.8e-61 36.7 229/236  
:HMM:PFM   51->256 PF00497 * SBP_bac_3 2.1e-25 25.6 199/225  
:HMM:PFM   279->479 PF00497 * SBP_bac_3 5e-17 23.1 195/225  
:HMM:PFM   544->693 PF00990 * GGDEF 9.6e-15 22.4 147/161  
:BLT:SWISS 36->489 BVGS_BORPE 2e-15 25.1 %
:BLT:SWISS 534->964 Y1727_PSEAE 1e-48 30.0 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACV56190.1 GT:GENE ACV56190.1 GT:PRODUCT diguanylate cyclase/phosphodiesterase GT:DATABASE GIB01015CH01 GT:ORG elen0 GB:ACCESSION GIB01015CH01 GB:LOCATION 2616659..2619604 GB:FROM 2616659 GB:TO 2619604 GB:DIRECTION + GB:PRODUCT diguanylate cyclase/phosphodiesterase GB:NOTE PFAM: EAL domain protein; GGDEF domain containing protein; extracellular solute-binding protein family 3; SMART: EAL domain protein; extracellular solute- binding protein family 3; GGDEF domain containing protein; KEGG: dds:Ddes_0639 diguanylate cyclase/phosphodiesterase GB:PROTEIN_ID ACV56190.1 GB:DB_XREF GI:257475870 InterPro:IPR000160 InterPro:IPR001633 InterPro:IPR001638 LENGTH 981 SQ:AASEQ MMFAWAFVIAFTCTVATTTYPGSSRAFADEFATFGKRVVTVTYFEDGDYMSTDEEGRYVGYNIEYLNEIARYADWTYEYVKYPSWEEACAALEASKVDLLPMVYYTEDRERRMIFSASSLCEISTTLNVRLDDTRYAYEDFKTFSGMRVGVIANSQDAEAFAQYSEKNGFSADIVAYSATGDLLRALDEGAVDAIAITYLGTNSRFRTVAQFVPEPLYIALSPERTDIADELDSAMSRLKLRDPDFATLLYDRYFGINTDQDPVFTEDEYAYLASAPTLRVAYDSYRAPLSYTDPETGAFAGAVALLFEDIAQITGLKFEFVAADCHDEAVRLVERGDADIVYDVDRESDPQAIKSLDTTGPYLRDPMALVAGPNPSGSRVALPSGFSLAASTAYSSYAEYDIVYCDTPKDCFDAVLEGKADIAFADTHVANYLLAEPQYESLSVTTITSFFNSMSIGVSRNADRRLVSILDRCVQYTAESKMTTWLSQSSLAVHPISPFDFLRQYPVQFMAGIVALLGSVLGVALYVSHVKLRAARRVEDFSFTDPLTEGWSLARFRSEVGAQMANARDGAYAIVYLDVKSFKGFNAAFGYATGDRVLLDLNGTLAGMKAPDERYAHVIADEFVLLVRWRGWDALLERFDELDRRFNSTETLTELSHRLMLQAGVCIIERSAETPRIDVQTIIEFVDAARYARDSIGEASRSTAALYSASMKDRDIAERALVAAAHDALERGEFTAYYQPKVEIATNRLVGFEALVRWESPERGLVPPDEFIPLFERTGLVVDLDLQVFRLVCARIREQLDAGEHPLVIACNFSRLHMRNDAFPETVKSIVDGFGVPIELLELELTENIVMEDLERAERLCRRLKDLGFRIAIDDFGSGYSSLGTLQNLPIDVLKLDRSFLMSSESGERCKAILDGVVSIADKLAVNVVVEGVETRDQASMLVRMDDRIIAQGFLYSRPVPRDVSDAQFAVGFIEPNERP GT:EXON 1|1-981:0| BL:SWS:NREP 2 BL:SWS:REP 36->489|BVGS_BORPE|2e-15|25.1|435/1238| BL:SWS:REP 534->964|Y1727_PSEAE|1e-48|30.0|423/685| TM:NTM 2 TM:REGION 1->23| TM:REGION 510->532| SEG 388->401|slaastayssyaey| SEG 512->526|agivallgsvlgval| SEG 840->848|ellelelte| BL:PDB:NREP 2 BL:PDB:REP 49->193|3h7mA|2e-08|27.0|137/228| BL:PDB:REP 729->943|2r6oA|3e-30|38.4|211/253| RP:PDB:NREP 4 RP:PDB:REP 49->259|3b6wA|6e-16|13.2|204/258| RP:PDB:REP 278->473|3delB|4e-12|14.6|191/232| RP:PDB:REP 534->645|3btaA|3e-13|4.5|112/1277| RP:PDB:REP 727->980|2basA|2e-45|17.2|244/393| RP:PFM:NREP 4 RP:PFM:REP 53->255|PF00497|1e-11|28.9|197/222|SBP_bac_3| RP:PFM:REP 277->347|PF09614|5e-04|35.2|71/292|Cas_Csy2| RP:PFM:REP 543->698|PF00990|8e-07|26.3|152/160|GGDEF| RP:PFM:REP 729->960|PF00563|5e-49|41.7|230/236|EAL| HM:PFM:NREP 4 HM:PFM:REP 726->960|PF00563|1.8e-61|36.7|229/236|EAL| HM:PFM:REP 51->256|PF00497|2.1e-25|25.6|199/225|SBP_bac_3| HM:PFM:REP 279->479|PF00497|5e-17|23.1|195/225|SBP_bac_3| HM:PFM:REP 544->693|PF00990|9.6e-15|22.4|147/161|GGDEF| GO:PFM:NREP 3 GO:PFM GO:0005215|"GO:transporter activity"|PF00497|IPR001638| GO:PFM GO:0006810|"GO:transport"|PF00497|IPR001638| GO:PFM GO:0030288|"GO:outer membrane-bounded periplasmic space"|PF00497|IPR001638| RP:SCP:NREP 4 RP:SCP:REP 56->256|1ii5A|3e-16|19.5|190/222|c.94.1.1| RP:SCP:REP 274->464|1ii5A|8e-11|15.8|183/222|c.94.1.1| RP:SCP:REP 562->743|1azsA|5e-11|5.6|178/190|d.58.29.1| RP:SCP:REP 729->962|2basA1|5e-52|20.3|227/257|c.1.33.1| HM:SCP:REP 2->262|1pb7A_|1.2e-25|27.1|218/0|c.94.1.1|1/2|Periplasmic binding protein-like II| HM:SCP:REP 274->488|1ii5A_|5.4e-24|26.1|207/0|c.94.1.1|2/2|Periplasmic binding protein-like II| HM:SCP:REP 548->699|1w25A3|9.8e-16|23.0|148/0|d.58.29.2|1/1|Nucleotide cyclase| HM:SCP:REP 723->964|2basA1|5.4e-72|42.2|237/0|c.1.33.1|1/1|EAL domain-like| OP:NHOMO 4966 OP:NHOMOORG 573 OP:PATTERN -------------------------------------------------1------------------ 71-37---111----3322-2822-122222-44442532989AZ-------435-----762-63A4442----1----C1657C44-----1--------------1---------------------------33333---34UKEEBB11-99---3--8E5-77B3------------B-41----46-666664561666666-1--1166643281BA12222156--------------------------3---------------------------------------------------------------4433811111115161K553343511--356414441----2-1114---52259931111124QHH657GDBEJ44554553546-LHGGG6CN7G31GDDFLNIMNNDDE79A71817955672--------C994-Q6G--------11111111111111111-----8A873855-2A676897555488JO8888668AK6E9J--FFDNAI9AI13S44EEJFFNSJE-------76BIQR12614489667AAA-867D682FA----21-26542----------------B9BID32IB6MOIQHPHaOMNNPLRINNMLMLJGKMK---BJAP------AC732E6CCCBCBDDBB-ACBDCB9CBCBCBABBBCDDDA66---A67AABAAAA9BAAAA67545597--633333312333---E-1-1-BCCCB2bAI---------------4444413-1-9LIJKHLSMNLLKLMGLMO-----2---J5BABGGGGGIKJPNBCBBBBBAAD1111--H-773256111111--2-4-------------------------1-111-1------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------3---------8-----------1--8-----4---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 949 STR:RPRED 96.7 SQ:SECSTR ####EEEEccccEEEEcccTTTcEEEEccccccccTEEEEcccTEcTTGGGccGGGGEEcHHHHHHHHHHHHHTccEEEEEcTcccHHHHHHHTTcccEcccccccHHHHTTEEEcccccEEEcEEEEEETTcccccHHHHHTcTTcHHHHHHHHcccHHHHHHHHHHTTcccccccccHHHHHHHHHHTTTcEEEEEEHcTTccEEEEcccccEEEccEEcTHHHHHHHHHHHHHHTTHHHHTHHHHHHHHHHTGGGccEEEEEEEHHHHccEEEEccEHHcHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHTccHHHHHHcccTTccEEEEHHcTTGGGcccccccHHHHHHHHHHHHHHHHHHHcEEEEEEcHHHHHHHHHHHHHHHHHHHHTccEEEEEEccHHHHHHHHHTTcccEEEEcHHHHHHHHHEcccccccGGGGGcccccEEEEEEEEcccccccGGGcTEEEccTTcTTTTHHHHHHHHHHHccccG###########################HHHHHHHHHHHHHHHHHHHHHHTTccTTTTcccccccEEEccTHHHHHHHHTTEEEccGGGcccGGGGEEEcccccccccHHHHHHcTTTHHHHHHHHHHHHccEEEEEcccHHHHHHHTcccccHHTTTccEEcccGGGGGGccccccccccEEHHHHHHHHHHHHHHHTccccEEcccccccGGGccHHHHEEcHHHHHTTTTEEEEEEEEEEcccccEEEEEEEEEEEETTEEEEcHHHHccccccHHHHHHHHHHHHHHHHHccccHHTTccTTcEEEEccHHHHGGTTHHHHHHHHHHHHTTccGGGEEEEEccTTccccHHHHHHHHHHHHTTTcEEEEEEETTTcccHHHHHHHcccEEEEEcTTTHHTTcccHHHHHHHHHHHHHHHHTcEEEEEccccHHHHHHHHHTTEEEEcccTTTcccccccccTTTTHHHHHHHHHH# PSIPRED cHHHHHHHHHHHHHHEEEEEEccccccHHHHHHccccEEEEEEccccccEEEcccccEEEccHHHHHHHHHHHccEEEEEEcccHHHHHHHHHcccccEEccccccHHHHHHHcccccccccccEEEEEEccccccccccHHHHcccEEEEEccccHHHHHHHHHHHccccEEEEEcccHHHHHHHHHccccEEEEHHHHHHHHHHccccccccccEEEEEccccHHHHHHHHHHHHHcccccHHHHHHHHcccccccccccccccHHHHHHHHHcccEEEEEEcccccEEEEcccccEEccHHHHHHHHHHHHHccEEEEEEcccHHHHHHHHHcccccEEEcccccccHHHHcccccccccccccEEEEEEEcccccEEEEcccccHHHHHHHHHcccEEEEEcccHHHHHHHHHccccEEEEEEcccEEEEEEccccHHEEEEEHHHHcccccHHHccccHHHHHHHHHHHHHcccHHHHHHHcccccccccccccHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHccccccEEEEEEEcccHHHHHHHccHHHHHHHHHHHHHHHHHHcccccEEEEEcccEEEEEEccccHHHHHHHHHHHHHHHHccEEEccEEEEEEEEEEEEEEccccccccccHHHHHHHHHHHHHHHHHHHHcccccEEEEcccHHHHHHHHHHHHHHHHHHHHcccEEEEEEEEEEcccccEEEEEEEEEEEcccccEEcHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHccccccEEEEEccHHHHccccHHHHHHHHHHHccccHHHEEEEEEHHHHHccHHHHHHHHHHHHHcccEEEEEcccccHHHHHHHHHccccEEEEcHHHHccccccHHHHHHHHHHHHHHHHcccEEEEEEcccHHHHHHHHHccccEEEEcHHHcccccHHHHHHHHHcccccccccc //