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Eggerthella lenta DSM 2243 (elen0)
Gene : ACV56248.1
DDBJ      :             ribonucleoside-diphosphate reductase, alpha subunit
Swiss-Prot:             

Homologs  Archaea  50/68 : Bacteria  785/915 : Eukaryota  193/199 : Viruses  18/175   --->[See Alignment]
a.98.1c.7.1
:845 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   185->833 2wghA PDBj 2e-83 35.7 %
:RPS:PDB   193->833 2cvuA PDBj e-151 31.7 %
:RPS:SCOP  1->101 1r1rA1  a.98.1.1 * 4e-07 14.9 %
:RPS:SCOP  167->312 1pemA1  a.98.1.1 * 7e-25 21.3 %
:RPS:SCOP  316->834 1r1rA2  c.7.1.2 * e-131 25.1 %
:HMM:SCOP  100->315 1rlrA1 a.98.1.1 * 2.3e-50 33.2 %
:HMM:SCOP  316->844 1rlrA2 c.7.1.2 * 8.4e-165 43.1 %
:RPS:PFM   1->92 PF03477 * ATP-cone 8e-11 36.8 %
:RPS:PFM   138->249 PF00106 * adh_short 1e-04 27.9 %
:RPS:PFM   238->312 PF00317 * Ribonuc_red_lgN 9e-15 44.0 %
:RPS:PFM   317->829 PF02867 * Ribonuc_red_lgC 2e-93 42.1 %
:HMM:PFM   316->830 PF02867 * Ribonuc_red_lgC 7.8e-167 43.3 485/533  
:HMM:PFM   237->312 PF00317 * Ribonuc_red_lgN 2.3e-23 39.5 76/83  
:HMM:PFM   1->93 PF03477 * ATP-cone 3.6e-22 36.4 88/89  
:BLT:SWISS 1->835 RIR1_TREPA 0.0 63.0 %
:PROS 703->725|PS00089|RIBORED_LARGE
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACV56248.1 GT:GENE ACV56248.1 GT:PRODUCT ribonucleoside-diphosphate reductase, alpha subunit GT:DATABASE GIB01015CH01 GT:ORG elen0 GB:ACCESSION GIB01015CH01 GB:LOCATION complement(2689963..2692500) GB:FROM 2689963 GB:TO 2692500 GB:DIRECTION - GB:PRODUCT ribonucleoside-diphosphate reductase, alpha subunit GB:NOTE KEGG: bha:BH0501 ribonucleotide-diphosphate reductase subunit alpha; TIGRFAM: ribonucleoside-diphosphate reductase, alpha subunit; PFAM: ribonucleotide reductase large subunit; ATP- cone domain protein; Ribonucleotide reductase large subunit domain protein GB:PROTEIN_ID ACV56248.1 GB:DB_XREF GI:257475928 InterPro:IPR000788 InterPro:IPR005144 InterPro:IPR013346 InterPro:IPR013509 LENGTH 845 SQ:AASEQ MQISKRNGTVEAYEAGKIKRAMGAAFASVGKVLDDEEADRLIARIERAMASAEQGEGGSVSVEDVQDLVERALMEANHYEELKSYILYREDRARKRVARERLCAQLPSVPALPGVLASVQKEFPGEEYELAHLSAKFQSFAKPDAADGQLLAMLVKAAVELTTQEAPRWEIIAARLLMVQFDRALAERLAARHIETFAQKVAFLTEEGLYGDYILQHYTPAELDEAAGFIDLSRNDLFTYAGLQLLLDRYVIRTHQGAPLESPQEMFLGIALHLAMEERASERMGWVRRFYDMLSTLKVTMATPTLSNARKPFHQLSSCFIDTVPDSLDGIYRSIDNFAKVSKYGGGMGLYFGKVRASGSAIRGFDGAAGGVIRWIRLANDTAVAVDQLGMRQGAVAVYLDAWHRDLPEFLALRTNNGDDRMKAHDVFPAVCYPDYFWQQARDNIEGDWYLMCPHEILTVKGYALEDCYGEEWTRKYLECVADARIKKRAIPIKDVIRLIIKSAVETGTPFTFNRDAVNRANPNKHRGMIYCSNLCTEIAQNMGAIEQLEQRIEDVDGEQVVVTVTKPGAFVVCNLASLSLGHIDMDDPHELAHVTESAVRALDNVIDLNFFPVPYAEINNRQYRPIGLGVSGYHHLLAKSGIRWESEEHLAFAERVFGDVHYAAVRASCAIAREKGAYGFFEGSGWQTGEYFRDRGLTDGRWAELARDVAEHGLRNGYLLAVAPTSSTSIIAGTTAGLDPVMNRYFLEEKKNGLMPRVAPELSMDTFWYYKNAHLIDQTWSVRACGVRQRHIDQAQSMNLYITNEYTFRRVLDLYLLAWEEGVKTIYYVRSKSLEVEECEVCSS GT:EXON 1|1-845:0| BL:SWS:NREP 1 BL:SWS:REP 1->835|RIR1_TREPA|0.0|63.0|832/845| PROS 703->725|PS00089|RIBORED_LARGE|PDOC00084| SEG 726->738|tsstsiiagttag| SEG 836->844|eveecevcs| BL:PDB:NREP 1 BL:PDB:REP 185->833|2wghA|2e-83|35.7|608/644| RP:PDB:NREP 1 RP:PDB:REP 193->833|2cvuA|e-151|31.7|602/651| RP:PFM:NREP 4 RP:PFM:REP 1->92|PF03477|8e-11|36.8|87/89|ATP-cone| RP:PFM:REP 138->249|PF00106|1e-04|27.9|111/169|adh_short| RP:PFM:REP 238->312|PF00317|9e-15|44.0|75/80|Ribonuc_red_lgN| RP:PFM:REP 317->829|PF02867|2e-93|42.1|478/506|Ribonuc_red_lgC| HM:PFM:NREP 3 HM:PFM:REP 316->830|PF02867|7.8e-167|43.3|485/533|Ribonuc_red_lgC| HM:PFM:REP 237->312|PF00317|2.3e-23|39.5|76/83|Ribonuc_red_lgN| HM:PFM:REP 1->93|PF03477|3.6e-22|36.4|88/89|ATP-cone| GO:PFM:NREP 9 GO:PFM GO:0008152|"GO:metabolic process"|PF00106|IPR002198| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF00106|IPR002198| GO:PFM GO:0004748|"GO:ribonucleoside-diphosphate reductase activity"|PF00317|IPR013509| GO:PFM GO:0005524|"GO:ATP binding"|PF00317|IPR013509| GO:PFM GO:0006260|"GO:DNA replication"|PF00317|IPR013509| GO:PFM GO:0055114|"GO:oxidation reduction"|PF00317|IPR013509| GO:PFM GO:0004748|"GO:ribonucleoside-diphosphate reductase activity"|PF02867|IPR000788| GO:PFM GO:0005971|"GO:ribonucleoside-diphosphate reductase complex"|PF02867|IPR000788| GO:PFM GO:0006260|"GO:DNA replication"|PF02867|IPR000788| RP:SCP:NREP 3 RP:SCP:REP 1->101|1r1rA1|4e-07|14.9|98/218|a.98.1.1| RP:SCP:REP 167->312|1pemA1|7e-25|21.3|141/162|a.98.1.1| RP:SCP:REP 316->834|1r1rA2|e-131|25.1|498/516|c.7.1.2| HM:SCP:REP 100->315|1rlrA1|2.3e-50|33.2|211/0|a.98.1.1|1/1|R1 subunit of ribonucleotide reductase, N-terminal domain| HM:SCP:REP 316->844|1rlrA2|8.4e-165|43.1|506/525|c.7.1.2|1/1|PFL-like glycyl radical enzymes| OP:NHOMO 1375 OP:NHOMOORG 1046 OP:PATTERN 11---11111111111-111111112211322--1--------1111-1-111-11111111111-11 1---121111111111122-211112222221222211111---111111111211111111-11111111-111111--2-11122111-1----1--11211121121111111111111111----------1111--32312211-111----------11-1----------------1111111-111112221122222112121112212121211111111112111111111111111112111-1-11-2-1-11111111111111122221221111111111111122222222222221111111111--11111-111111112--11111-1112---211--1-1111111-11123-211311111--1--111-1---11111111111---------1-21111111-111----121112111111111111111111111221111111111111111111111111111111111111111111111111111122222212122222211321222222243121112212221111111111111111-111112-1111111131211112111211111111111111111111111111112211111111111111111111111111111-1111111-11122121222222222222-222222222222222222222222222222222222213222222222222112223222332221111111111111211212221211111-111111111111111133331111111112111111111111121121111111211221111111111111111---------1--1-11211111---11-11111111111---1-111111111-- 1111111-311-1111112111111111121111111111111111111111111111111122222212122222212222222211-111111111111114231141223222111111111-111291-112111111111111111112111111643111-111111221111H1111121251112241117 ---1-1-1--------1--1-1-11-----------21-1--------------------------------------------------------------------------1-----------1-------------------------------------1-----1111- STR:NPRED 681 STR:RPRED 80.6 SQ:SECSTR #########################################################################################################################################################HHHHHHHHcccccccHHHcTTTHHHHTTccccccccHHHHHHHHHHcEETTTTEEccccHHHHHHHHHTHHHHHHHccGGGGGGccHHHHHHHHHHTccEETTEEccccHHHHHHHHHHHHHTTcHHHHHHHHHHHHHHHHHTTcEEEcHHHHHHTTccccccccEEEEcccccHHHHHHHHHHHHHHHTcccEEEEEcTTcccTTcccTTcccccccHHHHHHHHHHHHHHccccccccccEEEEEcTTcTTHHHHTTTTccccccTTccTTEEEEEEEcHHHHHHHHHTTTcEEEEccTTTHHHHHcTTGGGccHHHHHHHHHHHHHTTccEEEEEEHHHHHHHHHHHHHHHcccEEEEHHHHHHTcTTGGGcccccccTTccccccccccEEcTTccEEEcccT#TcccccTTccEEEcEEEEEGGGGEEcTTcHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHcccEEEEEcHHHHHHHTTccTTcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccTTcTTcTGGGTccGGGcccccccHHHHHHHHHHHcccccccccccccTTHHHHHTcccTTccccccccccccccHHHHHHcTTccHHHHHHcccGGGccHHHHHHHHHHHGGGccccccccEEccccccHHHHHHHHHHHHHTTccEEccEEcccc########## DISOP:02AL 845-846| PSIPRED cEEEccccccccccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHccHHHcccHHHHHHHHHHHHcccccccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHccHHHHHHHHHHHcHHccccccHHHHHHHHHHHHHHcccccEEccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHccccccccHHHcccccccccEEEEEEEcccccHHHHHHHHHHHHHHHHHcccEEEEccccccccccccccccccccHHHHHHHHHHHHHHHHHcccccccEEEEEEccHHHHHHHHHHccccccHHHHHHHccHHHcccHHHHHHHHccccccEEEEccccccHHccccHHHccHHHHHHHHHHHHHcccEEEEEEEHHHHHHHHHHHHHHHcccEEEEHHHHHHHccccccccEEEccccHHHcccccccccccccccccccccEEEcccccccEEEEEHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHcccEEEcccHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHcccccHHHHHHHHHHHHHHcccHHHcEEEcccHHHHHHHccccccccccccEEEEEEccccccccccHHHHHHHHHcccHHHccHHHHHHHHHHHHcHHHcEEEEEEEccccccHHHHHHHHHHHHHccccEEEEEccccccHHHHHHHcc //