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Eggerthella lenta DSM 2243 (elen0)
Gene : ACV56404.1
DDBJ      :             lipopolysaccharide biosynthesis protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  57/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:219 amino acids
:PSIPRED
:DISOPRED
:HMM:PFM   2->135 PF02706 * Wzz 6.7e-15 28.7 129/152  
:HMM:PFM   143->174 PF05199 * GMC_oxred_C 0.00027 40.6 32/145  
:BLT:SWISS 63->217 YWQC_BACSU 3e-18 31.0 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACV56404.1 GT:GENE ACV56404.1 GT:PRODUCT lipopolysaccharide biosynthesis protein GT:DATABASE GIB01015CH01 GT:ORG elen0 GB:ACCESSION GIB01015CH01 GB:LOCATION complement(2867756..2868415) GB:FROM 2867756 GB:TO 2868415 GB:DIRECTION - GB:PRODUCT lipopolysaccharide biosynthesis protein GB:NOTE PFAM: lipopolysaccharide biosynthesis protein; KEGG: bha:BH3669 capsular polysaccharide biosynthesis GB:PROTEIN_ID ACV56404.1 GB:DB_XREF GI:257476084 InterPro:IPR003856 LENGTH 219 SQ:AASEQ MTLLELFKLLRKHLALVVVLPVVLAIATAGFSWGLMQNQYTATVSVYVLTAKDDASSSSTTAYNDLTASQLMANDIATLAKSETVQKRTAEALGMSSLSGYKISVEAGTTTRVISISVTAGKPDAAAIVANEISTVLSTTAQSVMGVESVNVVDAAEVPTDPSGPPRAMYTAVAFLAGIFLAVAIVVVLDMLNTRVRNPEEAEELLGIPVIGRIPTIKG GT:EXON 1|1-219:0| BL:SWS:NREP 1 BL:SWS:REP 63->217|YWQC_BACSU|3e-18|31.0|155/248| TM:NTM 2 TM:REGION 13->35| TM:REGION 170->192| SEG 3->29|llelfkllrkhlalvvvlpvvlaiata| SEG 53->62|ddasssstta| HM:PFM:NREP 2 HM:PFM:REP 2->135|PF02706|6.7e-15|28.7|129/152|Wzz| HM:PFM:REP 143->174|PF05199|0.00027|40.6|32/145|GMC_oxred_C| OP:NHOMO 59 OP:NHOMOORG 57 OP:PATTERN -------------------------------------------------------------------- -----------------------------------------------------------------------1--------11---------------------------------------------------------------------------------------------------------------------11--11-11111---1111111-1--------1-1--------------1-----------1----------1-1-----111----1--1-111111111-------------1--------1---2----------1----1---1-11--11----211-1---111------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 218-220| PSIPRED ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHccccHHHHccccccccccEEEEEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHcccEEEEcccccc //