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Eggerthella lenta DSM 2243 (elen0)
Gene : ACV56413.1
DDBJ      :             transcriptional regulator, XRE family
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  87/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.35.1
:380 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   3->53 1y7yB PDBj 2e-04 41.2 %
:BLT:PDB   27->67 2r1jL PDBj 7e-06 48.8 %
:RPS:PDB   1->69 3clcB PDBj 5e-18 17.4 %
:RPS:SCOP  5->77 1s4kA  a.35.1.6 * 5e-18 11.0 %
:HMM:SCOP  1->69 2bnmA1 a.35.1.3 * 1.3e-18 44.9 %
:RPS:PFM   9->63 PF01381 * HTH_3 9e-11 49.1 %
:HMM:PFM   9->63 PF01381 * HTH_3 1e-21 52.7 55/55  
:BLT:SWISS 3->75 IMMR_BACSU 2e-09 37.0 %
:BLT:SWISS 153->211 POL_HV190 3e-04 31.0 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACV56413.1 GT:GENE ACV56413.1 GT:PRODUCT transcriptional regulator, XRE family GT:DATABASE GIB01015CH01 GT:ORG elen0 GB:ACCESSION GIB01015CH01 GB:LOCATION complement(2878888..2880030) GB:FROM 2878888 GB:TO 2880030 GB:DIRECTION - GB:PRODUCT transcriptional regulator, XRE family GB:NOTE PFAM: helix-turn-helix domain protein; CI repressor; SMART: helix-turn-helix domain protein; KEGG: bcz:BCZK1621 transcriptional regulator GB:PROTEIN_ID ACV56413.1 GB:DB_XREF GI:257476093 InterPro:IPR001387 InterPro:IPR010744 LENGTH 380 SQ:AASEQ MNVEIAQRLAERRKQAGLSQEALAARLGVSRQAVSKWERSESSPDTDNLIALAQLYGLSLDDLLYVDEEIRDDVTFEAADRAAKRQAEQETATASPADPPPAPADAAAASDASGGTEAASSGKKGKVHIGPGGIHVEDGDEYVHVSWRDGVHVKDAKKGEEVHVGWDGVHVKSPGNSAGDDDVVIDGAKVVINGEQFDSWQDAHARYHHGWDREERWYEPCGYTVRGERFDSIDDARAKYGDEVGRSIPVRKHYLREFEKSWVKFPYPLVVIVVYLLLGILNGAWAMGLFLFLTIPLYYMVGHAIGRKRLAPLVSGAYPIAVVAWFCWMAFVLNQPHPAWVAFLTIPVVEWLVHSLSRWWRDRKRRKGDAENAPIDVDAQ GT:EXON 1|1-380:0| BL:SWS:NREP 2 BL:SWS:REP 3->75|IMMR_BACSU|2e-09|37.0|73/127| BL:SWS:REP 153->211|POL_HV190|3e-04|31.0|58/1435| TM:NTM 3 TM:REGION 270->292| TM:REGION 312->334| TM:REGION 339->360| SEG 90->122|etataspadpppapadaaaasdasggteaassg| SEG 266->281|pyplvvivvylllgil| SEG 358->369|rwwrdrkrrkgd| BL:PDB:NREP 2 BL:PDB:REP 3->53|1y7yB|2e-04|41.2|51/66| BL:PDB:REP 27->67|2r1jL|7e-06|48.8|41/66| RP:PDB:NREP 1 RP:PDB:REP 1->69|3clcB|5e-18|17.4|69/77| RP:PFM:NREP 1 RP:PFM:REP 9->63|PF01381|9e-11|49.1|55/55|HTH_3| HM:PFM:NREP 1 HM:PFM:REP 9->63|PF01381|1e-21|52.7|55/55|HTH_3| GO:PFM:NREP 1 GO:PFM GO:0043565|"GO:sequence-specific DNA binding"|PF01381|IPR001387| RP:SCP:NREP 1 RP:SCP:REP 5->77|1s4kA|5e-18|11.0|73/120|a.35.1.6| HM:SCP:REP 1->69|2bnmA1|1.3e-18|44.9|69/0|a.35.1.3|1/1|lambda repressor-like DNA-binding domains| OP:NHOMO 114 OP:NHOMOORG 87 OP:PATTERN -------------------------------------------------------------------- ----------------------------------------------------------------------------112123----------------------------------------------------------------------------------------------------------------11111133-221123------222--1-----------1---1-1------------21-21-----1-11111--1--1111121121---122-----------1111-1111111-211---1111----11111111--------1--2111---2--22----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 89 STR:RPRED 23.4 SQ:SECSTR HHHHHHHHHHHHHHHTTccHHHHHHHTTccHHHHHHHHTTcccccHHHHHHHHHHTTccHHHHHHHHHHccTTTcHHHHHHHHHHHTTc################################################################################################################################################################################################################################################################################################### DISOP:02AL 195-214,235-235,241-242,244-244,249-249,297-298,300-300,305-305,380-381| PSIPRED cccHHHHHHHHHHHHccccHHHHHHHHcccHHHHHHHHcccccccHHHHHHHHHHHcccHHHHHcccccccHHHHHHHHHHHHHHHHHHHHccccccccccccccEEEEEccccccHHHHHccccEEEEcccEEEEccccEEEEEEcccccEEEccccccEEEEccccEEEccccccccccEEEEEccEEEEcHHHHccHHHHHHHHHcccccHHHHccccccEEcccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccc //