[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Eggerthella lenta DSM 2243 (elen0)
Gene : ACV56466.1
DDBJ      :             transcriptional regulator, BadM/Rrf2 family
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  595/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.4.5a.49.1
:136 amino acids
:SECSTR
:PSIPRED
:RPS:PDB   15->71 2acjC PDBj 2e-04 15.8 %
:RPS:SCOP  11->104 1f6vA  a.49.1.1 * 1e-11 12.0 %
:HMM:SCOP  2->138 1ylfA1 a.4.5.55 * 3e-34 42.5 %
:RPS:PFM   1->83 PF02082 * Rrf2 2e-14 46.3 %
:HMM:PFM   1->83 PF02082 * Rrf2 8.7e-26 45.1 82/83  
:BLT:SWISS 1->133 ISCR_ERWT9 6e-24 40.8 %
:PROS 50->68|PS01332|HTH_RRF2_1

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACV56466.1 GT:GENE ACV56466.1 GT:PRODUCT transcriptional regulator, BadM/Rrf2 family GT:DATABASE GIB01015CH01 GT:ORG elen0 GB:ACCESSION GIB01015CH01 GB:LOCATION complement(2938733..2939143) GB:FROM 2938733 GB:TO 2939143 GB:DIRECTION - GB:PRODUCT transcriptional regulator, BadM/Rrf2 family GB:NOTE TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: transcriptional regulator, BadM/Rrf2 family GB:PROTEIN_ID ACV56466.1 GB:DB_XREF GI:257476146 InterPro:IPR000944 LENGTH 136 SQ:AASEQ MMISTRGRYALRLMIDIARQGEAGALVTMRQAAEREDLSVKYLEQLGGALVKAGVLKSVRGVSGGYLLARPADQITAGDVLRATEGSCAPVSCLEDGAEACPRRDQCVAINFWRGLDQAIEDYVDNVTLADLVQMG GT:EXON 1|1-136:0| BL:SWS:NREP 1 BL:SWS:REP 1->133|ISCR_ERWT9|6e-24|40.8|130/165| PROS 50->68|PS01332|HTH_RRF2_1|PDOC01035| RP:PDB:NREP 1 RP:PDB:REP 15->71|2acjC|2e-04|15.8|57/66| RP:PFM:NREP 1 RP:PFM:REP 1->83|PF02082|2e-14|46.3|82/83|Rrf2| HM:PFM:NREP 1 HM:PFM:REP 1->83|PF02082|8.7e-26|45.1|82/83|Rrf2| RP:SCP:NREP 1 RP:SCP:REP 11->104|1f6vA|1e-11|12.0|83/91|a.49.1.1| HM:SCP:REP 2->138|1ylfA1|3e-34|42.5|134/0|a.4.5.55|1/1|"Winged helix" DNA-binding domain| OP:NHOMO 889 OP:NHOMOORG 595 OP:PATTERN -------------------------------------------------------------------- -1312-----------111-11--111111111111-1111111----------------21----11----------22332--1--------------------1------------------111112111111111-11-1121131111122------11222231------------1111122-31111111111111111113221111111112112222221111111111111111-11111----------------------------------------------------------------------11133222332313121111111225111113122222112321112-1-1--2223-111112--1211-----11111111112-111-11--223-333133333333111-11134544113--------1--1-44311-1-22111111111-1111-11-----11322111111111111111111111111111211123311222211221233113111111111121122122121---1-225243444-3422443212232-1111---1-----1---------11-1-11111121111112222212222212222112--11232------11111212222222211-2121222122222112112222111112122222222222222122222221-222222222222---1-----111131211111111111111111111111111111111111111111-1111---------311111111111111--11111111----112-------------------------------------------111--21222121 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 57 STR:RPRED 41.9 SQ:SECSTR ##############HHHHHHTcTTccccHHHHHHHHTccHHHHHHHHHHHHHTTcEEEEcccccEEEEccc################################################################# PSIPRED ccccHHHHHHHHHHHHHHHccccccEEcHHHHHHHHcccHHHHHHHHHHHHHcccEEEEEcccccccccccHHHccHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHcccHHHHHccc //