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Eggerthella lenta DSM 2243 (elen0)
Gene : ACV56492.1
DDBJ      :             deoxyxylulose-5-phosphate synthase
Swiss-Prot:             

Homologs  Archaea  44/68 : Bacteria  858/915 : Eukaryota  163/199 : Viruses  0/175   --->[See Alignment]
c.36.1c.48.1
:625 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   2->615 2o1xB PDBj e-119 46.2 %
:RPS:PDB   21->625 1ay0A PDBj 5e-70 19.5 %
:RPS:SCOP  11->345 1ni4A  c.36.1.11 * 1e-39 15.1 %
:RPS:SCOP  317->483 1dtwB1  c.36.1.7 * 3e-36 17.5 %
:RPS:SCOP  486->625 1ay0A3  c.48.1.1 * 4e-19 21.5 %
:HMM:SCOP  5->381 1w85A_ c.36.1.11 * 6.3e-72 36.2 %
:HMM:SCOP  290->484 1qgdA1 c.36.1.6 * 2.6e-65 49.2 %
:HMM:SCOP  491->625 1ni4B2 c.48.1.2 * 2.7e-35 47.4 %
:RPS:PFM   97->181 PF00676 * E1_dh 6e-10 35.7 %
:RPS:PFM   326->477 PF02779 * Transket_pyr 2e-20 40.1 %
:RPS:PFM   497->610 PF02780 * Transketolase_C 2e-08 37.5 %
:HMM:PFM   319->479 PF02779 * Transket_pyr 2e-42 33.8 160/178  
:HMM:PFM   495->615 PF02780 * Transketolase_C 3.9e-33 45.0 120/124  
:HMM:PFM   121->217 PF02775 * TPP_enzyme_C 3e-07 22.5 89/150  
:BLT:SWISS 5->619 DXS_SYNWW e-170 47.7 %
:PROS 31->50|PS00801|TRANSKETOLASE_1
:PROS 425->441|PS00802|TRANSKETOLASE_2
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACV56492.1 GT:GENE ACV56492.1 GT:PRODUCT deoxyxylulose-5-phosphate synthase GT:DATABASE GIB01015CH01 GT:ORG elen0 GB:ACCESSION GIB01015CH01 GB:LOCATION complement(2969638..2971515) GB:FROM 2969638 GB:TO 2971515 GB:DIRECTION - GB:PRODUCT deoxyxylulose-5-phosphate synthase GB:NOTE TIGRFAM: deoxyxylulose-5-phosphate synthase; PFAM: Transketolase central region; Transketolase domain protein; KEGG: gsu:GSU0686 1-deoxy-D-xylulose-5-phosphate synthase GB:PROTEIN_ID ACV56492.1 GB:DB_XREF GI:257476172 InterPro:IPR005474 InterPro:IPR005475 InterPro:IPR005476 InterPro:IPR005477 LENGTH 625 SQ:AASEQ MDKRILDIVSSPADLKLLTNEELSILAQEVREEIITTASETGGHVASSLGAVEIILAVHSMMDCPHDKIVFDVGHQAYAHKLITGRLDEFRTLRTYGGLSGFPKPDESPYDVHPSGHASDSLSVALGLAEARELRGSDEKIVAVIGDAALSGGMAFEALNHIGQAQTPMVIILNDNEMSISRNVGALMKHLGYMRATPQYRQTRDSVQEALESSGAFGNALANFGRNMKESMKQFVIPRTMIFEQLGIICTAPIDGHDIGLLKETLATVLHTDVPVLMHVVTRKGAGYAPAVQNPEKFHGIAPFEIATGDVKKKPSAAPSYTSVFGKALAAEARRDDRIVAITAAMKGGTGLDAFAEEFPERFVDAGIAEEHAVGLASGLATGGMKPVVALYSTFLQRAIDQVIINNALPNLDVVFAIDRAGIVGEDGPTHHGMFDLAYMRMIPHMRVLAPSDEAELVHALHTALELGGPFAIRYPRGAAEGVALPDEPHVLEEGRARVIREGDDVAILAFGRMVSRAKEAAALLAVRGIDARVVDMRWVKPLDVDEIARAAQTKLVVTVEGGIISGGVGEGVLNELARQGAAVPALTLGIPDTFVPQGSSNQLLHDLGLDAEGIADAVEQRLAR GT:EXON 1|1-625:0| BL:SWS:NREP 1 BL:SWS:REP 5->619|DXS_SYNWW|e-170|47.7|612/638| PROS 31->50|PS00801|TRANSKETOLASE_1|PDOC00635| PROS 425->441|PS00802|TRANSKETOLASE_2|PDOC00635| SEG 557->573|vvtveggiisggvgegv| BL:PDB:NREP 1 BL:PDB:REP 2->615|2o1xB|e-119|46.2|561/579| RP:PDB:NREP 1 RP:PDB:REP 21->625|1ay0A|5e-70|19.5|594/678| RP:PFM:NREP 3 RP:PFM:REP 97->181|PF00676|6e-10|35.7|84/298|E1_dh| RP:PFM:REP 326->477|PF02779|2e-20|40.1|152/172|Transket_pyr| RP:PFM:REP 497->610|PF02780|2e-08|37.5|112/122|Transketolase_C| HM:PFM:NREP 3 HM:PFM:REP 319->479|PF02779|2e-42|33.8|160/178|Transket_pyr| HM:PFM:REP 495->615|PF02780|3.9e-33|45.0|120/124|Transketolase_C| HM:PFM:REP 121->217|PF02775|3e-07|22.5|89/150|TPP_enzyme_C| GO:PFM:NREP 4 GO:PFM GO:0008152|"GO:metabolic process"|PF00676|IPR001017| GO:PFM GO:0016624|"GO:oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor"|PF00676|IPR001017| GO:PFM GO:0003824|"GO:catalytic activity"|PF02780|IPR005476| GO:PFM GO:0008152|"GO:metabolic process"|PF02780|IPR005476| RP:SCP:NREP 3 RP:SCP:REP 11->345|1ni4A|1e-39|15.1|324/362|c.36.1.11| RP:SCP:REP 317->483|1dtwB1|3e-36|17.5|166/188|c.36.1.7| RP:SCP:REP 486->625|1ay0A3|4e-19|21.5|130/146|c.48.1.1| HM:SCP:REP 5->381|1w85A_|6.3e-72|36.2|315/0|c.36.1.11|1/1|Thiamin diphosphate-binding fold (THDP-binding)| HM:SCP:REP 290->484|1qgdA1|2.6e-65|49.2|187/195|c.36.1.6|1/1|Thiamin diphosphate-binding fold (THDP-binding)| HM:SCP:REP 491->625|1ni4B2|2.7e-35|47.4|133/138|c.48.1.2|1/1|TK C-terminal domain-like| OP:NHOMO 2546 OP:NHOMOORG 1065 OP:PATTERN 22-1--1122222221-122111-2111-111---11111111-----------11-111-222--11 225361121112-123333-3211563233335333358423443343222383622511325254755331222111422262123222231111112233354334372222222222222232212222224244422223242331223222211121122153311222212121221231112213234444434434443345444444433563332233322543222222222222222222212--11-31-222222112111133222211221112222212121211111111111-1111111222223248333344344514223222123114342222322212224332433331111221211545553234533544444344444-444446444421455133734286272244424555433444444443552343322122111-1----11--11-----1-11135A3422121633244233334457333224226242211221321112123321132111121111111111222133341111141111555355644223223241112111111111121111111331222242323232334222333222222222331-151121--11121333431111111111-1111111111111111113445211124333333333343433311111111122122222222221122222222221211212232121111211133333122214133331222222321221111111111-22141111123144332222222211111132333344--------11------------1----1-1------2322224232222 23--211-611-121211---1-111111--------------12211--111112111111-2111111121-122-122111111--2-1112211--1-111112422574431312234244272Ee4-644131142362132124215-223323412221622A11523232T2223365C8-533221112 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 625 STR:RPRED 100.0 SQ:SECSTR HHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHTcccTccEEEEccGGGHHHHHHHTTccccHHHHTTTTccccccccTTcTTcccccccTTHHHHHHHHHHHHHHHHcccccEEEEEcHHHHHcHHHHHHHHHHHHTTcTTEEEEEEccEETTEEGGGTccccHHHHHHHHTEEEccTTTcHHHHHHHHHHHTTcTTccEEEEEEcccTTTTcTTTTcGGGTcccccHHHHHHHHHHTTccTTccccccHHHHHHHHHHTHHHHHHHHHHHHHHHHHGGGcccccTTcccEEHHHHHHHHHHHHTTTcTTEEEEEcccHHHHTcGGccEETTccEEEccccHHHHHHHHHHHHHHcTTcEEEEEHHHHGGGHHHHHHHHHHTcccEEEEEcccGGGcTTcTTcccccHHHHHTcccccEEEccccHHHHHHHHHHHHHccccEEEEccccEEcccTTccHHHHTTccEEEEccccccEEEEEcTTHHHHHHHHHHHHHHTTccEEEEEcccHHHHHTccHHHHHHHccEEEEEEEEccTTccEEEEcccccGGGGGTccEEEccccccccccHHHHHHHHTccHHHHHHHHHHHHHH DISOP:02AL 624-626| PSIPRED cccHHHcccccHHHHHHccHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHccccccccEEEEEcccHHHHHHHHcccHHHHHHHHHHccccccccccccccEEEcccccHHHHHHHHHHHHHHHHHccccEEEEEEEcHHcccHHHHHHHHHHHHHcccEEEEEEcccccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHHcccccEEEEEcHHHccHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHcccEEEEcHHHcccccHHHHHHHccccEEEccccHHHHHHHHHHHHHcccEEEEEHHHHHHHHHHHHHHHHHHHHcccEEEEEEcccccccccHHHccccHHHHHHHHcccEEEEEccHHHHHHHHHHHHcccccEEEEEEcccccccccccccccccccEEEEEEccccEEEEEccHHHHHHHHHHHHHHHcccEEEEEEcHHcccccHHHHHHHHHcccEEEEccccHHccHHHHHHHHHHHccccccEEEEEEcccccccccHHHHHHHHcccHHHHHHHHHHHHcc //