[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Eggerthella lenta DSM 2243 (elen0)
Gene : ACV56648.1
DDBJ      :             transcriptional regulator, LuxR family
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  3/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.4.1a.4.6
:478 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   413->467 1fseE PDBj 7e-05 40.0 %
:RPS:PDB   413->466 3cloA PDBj 3e-13 35.2 %
:RPS:SCOP  411->451 1resA  a.4.1.2 * 1e-11 22.0 %
:RPS:SCOP  427->464 1fseF  a.4.6.2 * 3e-06 15.8 %
:HMM:SCOP  391->470 1p4wA_ a.4.6.2 * 2.7e-12 36.2 %
:RPS:PFM   413->464 PF00196 * GerE 2e-06 46.2 %
:HMM:PFM   413->466 PF00196 * GerE 1.9e-16 44.4 54/58  
:HMM:PFM   8->131 PF07690 * MFS_1 5.7e-05 20.0 120/353  
:BLT:SWISS 226->337 UPPP4_BACHK 6e-04 23.2 %
:BLT:SWISS 413->465 NREC_STAHJ 2e-07 45.3 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACV56648.1 GT:GENE ACV56648.1 GT:PRODUCT transcriptional regulator, LuxR family GT:DATABASE GIB01015CH01 GT:ORG elen0 GB:ACCESSION GIB01015CH01 GB:LOCATION 3126715..3128151 GB:FROM 3126715 GB:TO 3128151 GB:DIRECTION + GB:PRODUCT transcriptional regulator, LuxR family GB:NOTE PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: vha:VIBHAR_03493 hypothetical protein GB:PROTEIN_ID ACV56648.1 GB:DB_XREF GI:257476328 InterPro:IPR000792 LENGTH 478 SQ:AASEQ MAHTKKTQLFLVATGFACFLAMNSFSLWGFSFLPQFAFGASAQDSWSTPVSLSNIVAFFVYFLGSTRFPRLFDRAPFFEAVLLIAAGMIFLLGFFVTSSAVMLTVSAVLVGVGTTCCFICWETVLSLSEPRETKKQIILGSVLSLLPFGLFFAFGQAGLLFTESLLAFCNLVLLFFTLRFEGGAPATAPVATPPAGAAPRVPLLIRSRFWKPLLCIVMIGVISPVIGSVAFSDDLAFFESCAIVFAANLVSAAILAVVWLALDKETTISKAYVVLFPVLITAFLAFPFVAEQYRTLVLFVGSFGFTLFSIVMMVSCISIASERGLGLVFVYALFAGVTYASRLIGQGLAAVIGRSSLSQETQIVTSVFVLLYGCSLVMFILVRKSAARPKEAAPSGVDVLQQACAQLAAERGLSARQTEVLDLLAHGYDVPSIAKKLFISENTVRTHTKKIYALLDVHAKQEIVDLVNARCGKDAQDE GT:EXON 1|1-478:0| BL:SWS:NREP 2 BL:SWS:REP 226->337|UPPP4_BACHK|6e-04|23.2|112/100| BL:SWS:REP 413->465|NREC_STAHJ|2e-07|45.3|53/217| TM:NTM 11 TM:REGION 13->35| TM:REGION 48->70| TM:REGION 76->98| TM:REGION 105->127| TM:REGION 147->169| TM:REGION 209->231| TM:REGION 240->262| TM:REGION 269->291| TM:REGION 296->318| TM:REGION 321->343| TM:REGION 361->382| SEG 145->161|llpfglffafgqagllf| SEG 183->202|gapatapvatppagaaprvp| BL:PDB:NREP 1 BL:PDB:REP 413->467|1fseE|7e-05|40.0|55/64| RP:PDB:NREP 1 RP:PDB:REP 413->466|3cloA|3e-13|35.2|54/249| RP:PFM:NREP 1 RP:PFM:REP 413->464|PF00196|2e-06|46.2|52/57|GerE| HM:PFM:NREP 2 HM:PFM:REP 413->466|PF00196|1.9e-16|44.4|54/58|GerE| HM:PFM:REP 8->131|PF07690|5.7e-05|20.0|120/353|MFS_1| GO:PFM:NREP 4 GO:PFM GO:0003700|"GO:transcription factor activity"|PF00196|IPR000792| GO:PFM GO:0005622|"GO:intracellular"|PF00196|IPR000792| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00196|IPR000792| GO:PFM GO:0043565|"GO:sequence-specific DNA binding"|PF00196|IPR000792| RP:SCP:NREP 2 RP:SCP:REP 411->451|1resA|1e-11|22.0|41/43|a.4.1.2| RP:SCP:REP 427->464|1fseF|3e-06|15.8|38/50|a.4.6.2| HM:SCP:REP 391->470|1p4wA_|2.7e-12|36.2|80/0|a.4.6.2|1/1|C-terminal effector domain of the bipartite response regulators| OP:NHOMO 74 OP:NHOMOORG 3 OP:PATTERN -------------------------------------------------------------------- -------------------------------------------------------------------------------9rC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 90 STR:RPRED 18.8 SQ:SECSTR ############################################################################################################################################################################################################################################################################################################################################################################################HHHHGGGccHHHHHHHHHHHHHHHHHccTTTcccHHHHHHHHHHHTTccHHHHHHHHTccHHHHHHHHHHHHHHTTcccHHHHHHHHHTH######## DISOP:02AL 17-17,53-53,59-59,62-62,143-143,146-146,151-152,157-158,160-160,165-166,171-172,174-174,179-179,193-193,199-199,207-207,241-241,244-244,249-249,258-258,263-263| PSIPRED cccccccEEEEEEHHHHHHHHHcccHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHcccccHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHccEEHHEEcHHHHHHHHHHcHHHHHHHHHHccccEEEEEEccccHHHHHHHHHccccEEEEccccccHHHHHHHHHHHHcccccccHHHHHHHHccccccHHHHHHHHHHccccccccccccHHHHHHHHHHHccccHHHHHHHHcccHHHHHHHHHHHHHHcccccHHHHHHHHHHHcccccccc //