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Eggerthella lenta DSM 2243 (elen0)
Gene : ACV56688.1
DDBJ      :             transcriptional regulator, XRE family
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  73/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.35.1
:395 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   1->64 3clcB PDBj 2e-13 17.2 %
:RPS:SCOP  1->64 1x57A1  a.35.1.12 * 8e-13 20.3 %
:HMM:SCOP  1->67 2bnmA1 a.35.1.3 * 5.4e-15 41.8 %
:RPS:PFM   10->61 PF01381 * HTH_3 2e-08 46.2 %
:RPS:PFM   251->335 PF06800 * Sugar_transport 1e-04 32.1 %
:HMM:PFM   10->61 PF01381 * HTH_3 6.6e-13 42.3 52/55  
:HMM:PFM   88->140 PF11377 * DUF3180 0.00066 28.3 53/138  
:BLT:SWISS 3->64 YQAE_BACSU 9e-06 27.4 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACV56688.1 GT:GENE ACV56688.1 GT:PRODUCT transcriptional regulator, XRE family GT:DATABASE GIB01015CH01 GT:ORG elen0 GB:ACCESSION GIB01015CH01 GB:LOCATION 3175862..3177049 GB:FROM 3175862 GB:TO 3177049 GB:DIRECTION + GB:PRODUCT transcriptional regulator, XRE family GB:NOTE PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: swd:Swoo_4720 XRE family transcriptional regulator GB:PROTEIN_ID ACV56688.1 GB:DB_XREF GI:257476368 InterPro:IPR001387 LENGTH 395 SQ:AASEQ MSFADNLVYLRQHYGITQEGLAEQLSVSRQTVSKWKAGTNYPEMDKLLQLCDLFHTSLDDLMRGSVHVVKENDTERYDEHMNRFDLSIAAGVACILVGVGLNALLEAFGWPDNLQTVALLSCIVIGVVILVVGSLNHSEFKRRNPSIEPRYSSDTLDRFGQRYPTLIAVGVGLILIDVIMLIGLVPDNSSSMINGAYVEELVMFPFMLILAIAIGILIWACMQKSKYDLSELTYIAHRRNLGADMPSTAVVKSPEQIRAERVMGVICGCIMLLATIVFLVWGFVPLFDQIGGWDGIDKFALKDAIRRGAGGFAISWIAFVVGGILCGIVWMIGSVVSKTQEDWIAEARQEDAWVKYAQQDDPWSRGPEDPASSQTPAPSSAPREANDPAGRTWKH GT:EXON 1|1-395:0| BL:SWS:NREP 1 BL:SWS:REP 3->64|YQAE_BACSU|9e-06|27.4|62/116| TM:NTM 6 TM:REGION 86->108| TM:REGION 114->135| TM:REGION 164->186| TM:REGION 200->222| TM:REGION 264->286| TM:REGION 313->335| SEG 119->135|llscivigvvilvvgsl| SEG 208->220|lilaiaigiliwa| SEG 370->382|passqtpapssap| RP:PDB:NREP 1 RP:PDB:REP 1->64|3clcB|2e-13|17.2|64/77| RP:PFM:NREP 2 RP:PFM:REP 10->61|PF01381|2e-08|46.2|52/55|HTH_3| RP:PFM:REP 251->335|PF06800|1e-04|32.1|81/267|Sugar_transport| HM:PFM:NREP 2 HM:PFM:REP 10->61|PF01381|6.6e-13|42.3|52/55|HTH_3| HM:PFM:REP 88->140|PF11377|0.00066|28.3|53/138|DUF3180| GO:PFM:NREP 4 GO:PFM GO:0043565|"GO:sequence-specific DNA binding"|PF01381|IPR001387| GO:PFM GO:0008643|"GO:carbohydrate transport"|PF06800|IPR010651| GO:PFM GO:0015144|"GO:carbohydrate transmembrane transporter activity"|PF06800|IPR010651| GO:PFM GO:0016021|"GO:integral to membrane"|PF06800|IPR010651| RP:SCP:NREP 1 RP:SCP:REP 1->64|1x57A1|8e-13|20.3|64/78|a.35.1.12| HM:SCP:REP 1->67|2bnmA1|5.4e-15|41.8|67/0|a.35.1.3|1/1|lambda repressor-like DNA-binding domains| OP:NHOMO 106 OP:NHOMOORG 73 OP:PATTERN -------------------------------------------------------------------- ------------------------------------------------------------------------111-111-42----------------------------------------------------------------------------------------------------------------11111112-111121--------2--1-----------1-1121211111111----2--11--------2122-11--2-1------1---122------------------------2--------1----23332422-2------1--2-111-----21----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 85 STR:RPRED 21.5 SQ:SECSTR HHHHHHHHHHHHHTTccHHHHHHHTTccHHHHHHHHTTcccccHHHHHHHHHHTTccHHHHHHHHTTcccTTcHHHHHHHHHHHc###################################################################################################################################################################################################################################################################################################################### DISOP:02AL 166-182,241-241,244-244,269-269,395-396| PSIPRED ccHHHHHHHHHHHccccHHHHHHHHcccHHHHHHHHcccccccHHHHHHHHHHHcccHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHccccHHHHHHcccccccccccccHHHHHHHcHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHcccccccHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccc //