[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Eggerthella lenta DSM 2243 (elen0)
Gene : ACV56764.1
DDBJ      :             fumarate reductase/succinate dehydrogenase flavoprotein domain protein
Swiss-Prot:             

Homologs  Archaea  1/68 : Bacteria  162/915 : Eukaryota  10/199 : Viruses  0/175   --->[See Alignment]
b.52.1c.3.1
:582 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   69->573 1qo8A PDBj 2e-27 30.0 %
:RPS:PDB   109->578 1e39A PDBj 7e-25 19.8 %
:RPS:SCOP  69->384 1d4cA2  c.3.1.4 * 2e-16 20.7 %
:RPS:SCOP  355->578 2pnwA1  b.52.1.4 * 2e-14 9.2 %
:HMM:SCOP  59->579 1jnrA2 c.3.1.4 * 7.9e-32 22.4 %
:RPS:PFM   122->553 PF00890 * FAD_binding_2 1e-11 32.6 %
:HMM:PFM   81->555 PF00890 * FAD_binding_2 2.2e-41 26.8 385/421  
:HMM:PFM   9->30 PF10518 * TAT_signal 3.3e-05 63.6 22/26  
:BLT:SWISS 69->573 FRD2_SHEFN 5e-27 30.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACV56764.1 GT:GENE ACV56764.1 GT:PRODUCT fumarate reductase/succinate dehydrogenase flavoprotein domain protein GT:DATABASE GIB01015CH01 GT:ORG elen0 GB:ACCESSION GIB01015CH01 GB:LOCATION 3265146..3266894 GB:FROM 3265146 GB:TO 3266894 GB:DIRECTION + GB:PRODUCT fumarate reductase/succinate dehydrogenase flavoprotein domain protein GB:NOTE PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: sbm:Shew185_1157 fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein GB:PROTEIN_ID ACV56764.1 GB:DB_XREF GI:257476444 InterPro:IPR003953 InterPro:IPR006311 LENGTH 582 SQ:AASEQ MKNIAEQGLSRRSFLTGAAATGALAAFGLAGCAPQAKAETSGDATKADAAETKADASAQTDWLGSAPDIAAGDIKETKQTDLLIIGAGNGGMAAAATAADLGLDFMLCEKSGSIQRSRHWFGAINTKYTETAGAHVDEGRLLNEFSRYASGQCDQRVIRVWIKESASVVDWIDPILTQAGMTCAFDNDIDHETGGTSFALFPMEHYYSGKDAAGEALERNKVLLSYINDKGYDVTYNHKLVKLVQDDAGKVTGAIFEADGGYVQVDAAKGVLLTTGGYTSNAEMLRACNPMVDRCVTLQYGSPNNVGEGIKAGMWAGAQKDSIGAPMIFDRGTVKPGENAGIISSPGETATFVGTDKQFNLGSQPLMKVTRDGKRFVNESTPYDFCCFAAAEHEGGVFCQVFDSNLKEDVKRFNTIGCSRQTQQLLAKEADTPLDEIYADQLEKGTMVKADTIEELAVKLGFSGEAKDAFLAEVEKYNGFYDAQEDPDFGKEAYRLSELRTAPFYGIWYGGSLLTTVDGLRINEDMQVLNAESQPIEGLYAAGDCSGSIFGNNYPEYIVGCACGRTITFARHAVRHMVGDLS GT:EXON 1|1-582:0| BL:SWS:NREP 1 BL:SWS:REP 69->573|FRD2_SHEFN|5e-27|30.0|434/588| SEG 14->31|fltgaaatgalaafglag| SEG 43->58|datkadaaetkadasa| SEG 86->99|gagnggmaaaataa| BL:PDB:NREP 1 BL:PDB:REP 69->573|1qo8A|2e-27|30.0|434/564| RP:PDB:NREP 1 RP:PDB:REP 109->578|1e39A|7e-25|19.8|419/568| RP:PFM:NREP 1 RP:PFM:REP 122->553|PF00890|1e-11|32.6|319/375|FAD_binding_2| HM:PFM:NREP 2 HM:PFM:REP 81->555|PF00890|2.2e-41|26.8|385/421|FAD_binding_2| HM:PFM:REP 9->30|PF10518|3.3e-05|63.6|22/26|TAT_signal| GO:PFM:NREP 2 GO:PFM GO:0009055|"GO:electron carrier activity"|PF00890|IPR003953| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF00890|IPR003953| RP:SCP:NREP 2 RP:SCP:REP 69->384|1d4cA2|2e-16|20.7|290/322|c.3.1.4| RP:SCP:REP 355->578|2pnwA1|2e-14|9.2|206/354|b.52.1.4| HM:SCP:REP 59->579|1jnrA2|7.9e-32|22.4|308/357|c.3.1.4|1/1|FAD/NAD(P)-binding domain| OP:NHOMO 467 OP:NHOMOORG 173 OP:PATTERN ------------------------------1------------------------------------- --------223---16611-13--2511111254342676-1-3----1-----1-------3----------------BnG-------------------------------------------------------11--------------------------------------------1-------------------------1-----------1---111111------------------11--12-4113131144---1------111--------22-------------------------11---1112-B6-2------------------24-2------MJ-----1-------1---------------4-1------1------------------1--2-1-1-----------1--1-1-----1--1-----------------------------------------------44--1543----11-1-------3------1-2-1-2-----1-----2---1-----------------------1-------------21151----21-2-----12------------------1-------1--------21211-4311223241351---------------22-11-----------------------------122221------------------------------------------------------------------------------------3-11-1-11--1221-----------------------1----------------------------------------------------------------------------- -------------1------11------------1-------------1----5---------------------------------------------------------------------------------------------------------------------21------M-------1----------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 513 STR:RPRED 88.1 SQ:SECSTR ####################################################################HHcccccEEEEccEEEEcccHHHHHHHHHHHHHTccEEEEHTTccEEEEcccccccTTGGGccccEEccccHHHHHTTccccHHHHHHHHHHHTTTcccHHHHHHHHHHHHHHHHHHHHTTccccEEEccTTcccccEEEcTTTccHHHHHHHHHHHHHHHTTcEEEccEEEEEEEEcTTccEEEEEEEETTTEEEEEEEEEEEEcccccTTcHHHHHHHcGGGTTccccccccTTcccHHHHHHHHTTccEEcTTcEEEEEEEETTTcccccTHHHHHHHHTHTTccccTHHHHTTcEEEcTTccccccTTccHHHHHHHHHTcGGGcEEEEEEHHHHHHcTTHHHHHHHHHcTHHHHHHHHTcHcTHHHHHHHTTcccEEccHHHHHHHHHHHTccHHHHHHHHHHHHHHHHTTccTTTccccccccccccccEEEEEEEEEEEEEccEEEccTTcEEEcTTccEEEEEEEccTTEEcccTTcccTcccTHHHHHHHHHHHHHHHHHHHHH# DISOP:02AL 582-583| PSIPRED cccHHHccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEEcccHHHHHHHHHHHHccccEEEEEEccccccccccccccccHHHHHHcccccHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHcccEEEEcEEEEEEEEEcccEEEEEEEEEccEEEEEEEccEEEEEcccccccHHHHHHHcccccccccccccccccHHHHHHHHHHccccccccccEEEccccccccccccccccccccccccccccHHcccccccEEEEccccccccccccccHHHHHHHHHccccEEEEEccccHHHHHHHHHHcccccccccccccccccccHHHHHHHHHcccccccccHHHHHHHccccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccEEEEEEEEEEEEccccEEEccccEEEccccccccccHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHc //