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Eggerthella lenta DSM 2243 (elen0)
Gene : ACV56924.1
DDBJ      :             transcriptional regulator, XRE family
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  62/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.35.1
:312 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   5->61 1utxA PDBj 2e-05 35.1 %
:RPS:PDB   1->65 3clcB PDBj 6e-15 15.4 %
:RPS:SCOP  3->66 2auwA1  a.35.1.10 * 4e-14 10.9 %
:HMM:SCOP  1->65 2bnmA1 a.35.1.3 * 8.2e-15 40.0 %
:RPS:PFM   7->61 PF01381 * HTH_3 1e-07 41.8 %
:HMM:PFM   9->61 PF01381 * HTH_3 3.2e-15 34.0 53/55  
:HMM:PFM   94->158 PF01757 * Acyl_transf_3 0.0002 13.8 65/340  
:BLT:SWISS 1->61 RSR1_VIBCH 9e-07 32.8 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACV56924.1 GT:GENE ACV56924.1 GT:PRODUCT transcriptional regulator, XRE family GT:DATABASE GIB01015CH01 GT:ORG elen0 GB:ACCESSION GIB01015CH01 GB:LOCATION complement(3461582..3462520) GB:FROM 3461582 GB:TO 3462520 GB:DIRECTION - GB:PRODUCT transcriptional regulator, XRE family GB:NOTE PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: bcz:pE33L466_0162 transcriptional regulator GB:PROTEIN_ID ACV56924.1 GB:DB_XREF GI:257476604 InterPro:IPR001387 LENGTH 312 SQ:AASEQ MSFRDNLQHLRDTRNMTQSELAMLVGVSRQSVAKWEAEKSYPEMDKLLKLCDLFECTLDDLVRGDLTGRAPDPTRSLPEDAPPVDACGYDEHMRRRAWTVPAGLAMFVAGFGVAIAFSNMNGANPGARPYIAYFACATVGFALLIRAFAVHGSFRRRHPYIEDFYTDDQRVAARKEGKRSAVGGLVLLCASLFFASPGAIALADTLNLWGLMANVWNVYGTLPLLLFALLAASVALLVHAAMVVCLINVARYNRDSERKAEAASHLVAAMQARLAQSAGAAETGAGADADTPSVSHSNETHERKPSQSDGEA GT:EXON 1|1-312:0| BL:SWS:NREP 1 BL:SWS:REP 1->61|RSR1_VIBCH|9e-07|32.8|61/112| TM:NTM 4 TM:REGION 98->119| TM:REGION 130->152| TM:REGION 185->207| TM:REGION 225->247| SEG 222->246|lplllfallaasvallvhaamvvcl| SEG 278->291|agaaetgagadadt| BL:PDB:NREP 1 BL:PDB:REP 5->61|1utxA|2e-05|35.1|57/66| RP:PDB:NREP 1 RP:PDB:REP 1->65|3clcB|6e-15|15.4|65/77| RP:PFM:NREP 1 RP:PFM:REP 7->61|PF01381|1e-07|41.8|55/55|HTH_3| HM:PFM:NREP 2 HM:PFM:REP 9->61|PF01381|3.2e-15|34.0|53/55|HTH_3| HM:PFM:REP 94->158|PF01757|0.0002|13.8|65/340|Acyl_transf_3| GO:PFM:NREP 1 GO:PFM GO:0043565|"GO:sequence-specific DNA binding"|PF01381|IPR001387| RP:SCP:NREP 1 RP:SCP:REP 3->66|2auwA1|4e-14|10.9|64/67|a.35.1.10| HM:SCP:REP 1->65|2bnmA1|8.2e-15|40.0|65/0|a.35.1.3|1/1|lambda repressor-like DNA-binding domains| OP:NHOMO 80 OP:NHOMOORG 62 OP:PATTERN -------------------------------------------------------------------- ------------------------------------------------------------------------111-111-55----------------------------------------------------------------------------------------------------------------11111114-1-1111------111--------------1-1222211111111----11-1---------11----------111---1----11------------------------2-------------11111111-----------2--1------21----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 112 STR:RPRED 35.9 SQ:SECSTR HHHHHHHHHHHHHTTccHHHHHHHTTccHHHHHHHHTTcccccHHHHHHHHHHTTccHHHHHHHHHHHHHHHHHHHHTcHHHHHHHHcGGGHHcTTcTTcEEEEEEEccccG######################################################################################################################################################################################################## DISOP:02AL 208-226,244-244,249-250,255-256,258-258,263-263,277-277,283-283,286-286,291-291,305-305,311-313| PSIPRED ccHHHHHHHHHHHccccHHHHHHHHcccHHHHHHHHcccccccHHHHHHHHHHHcccHHHHHcccccccccccccccccccccccccHHHHHHHHHcccccccHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHccccHHcccHHHHHcccccHHHHHHccHHHHccccEEEccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHcccccccccc //