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Eggerthella lenta DSM 2243 (elen0)
Gene : ACV56955.1
DDBJ      :             UV-endonuclease UvdE
Swiss-Prot:             

Homologs  Archaea  4/68 : Bacteria  73/915 : Eukaryota  69/199 : Viruses  2/175   --->[See Alignment]
c.1.15c.116.1
:420 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   3->287 3bzgA PDBj 2e-39 37.4 %
:RPS:PDB   37->291 3c0sA PDBj 3e-28 41.8 %
:RPS:SCOP  126->183 1to0A  c.116.1.3 * 4e-04 27.6 %
:HMM:SCOP  41->220 4xiaA_ c.1.15.3 * 3.7e-14 32.5 %
:RPS:PFM   7->260 PF03851 * UvdE 1e-51 43.0 %
:RPS:PFM   315->417 PF08349 * DUF1722 9e-10 35.9 %
:HMM:PFM   27->262 PF03851 * UvdE 1.9e-63 34.7 236/276  
:HMM:PFM   315->418 PF08349 * DUF1722 4.1e-13 25.0 104/117  
:BLT:SWISS 1->417 UVSE_CLOPE 4e-68 35.6 %

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACV56955.1 GT:GENE ACV56955.1 GT:PRODUCT UV-endonuclease UvdE GT:DATABASE GIB01015CH01 GT:ORG elen0 GB:ACCESSION GIB01015CH01 GB:LOCATION 3497384..3498646 GB:FROM 3497384 GB:TO 3498646 GB:DIRECTION + GB:PRODUCT UV-endonuclease UvdE GB:NOTE TIGRFAM: UV-endonuclease UvdE; PFAM: UV-endonuclease UvdE; KEGG: dds:Ddes_1549 UV-endonuclease UvdE GB:PROTEIN_ID ACV56955.1 GB:DB_XREF GI:257476635 InterPro:IPR004601 LENGTH 420 SQ:AASEQ MSIGYASKTLAAPGARMQSVVQRLATPDRLAQAIDGNLRALDAALDYQAKNGIHLFRISSDVIPFGSSPVNALDWMRDFEPHLAALGRKARRHGIRLSMHPGQYTVLNSPDADVVERAKLDLAYHAAFLDALGMDASGKIVLHVGGAYGDKPRALERFANAYATLPLAVRRRLVIENDDRLFTAQDVLALSRATGAPMVFDTLHHELNREPDAPDWRALLDEAAATWKPEDGAQKMHYAQQAPGRRPGSHTDTIELAPFLAFYRSLAEHRTDSSFGMPDIMLEVKDKNLSAIKCILCTSEHGRFSRLEREWARYKYAVLEHDQAAYLALRALLKDKRTWPTVPFYEIVERALAAPVEPGSFRNAAQHVWGYVAPHATAREHAAFERLLEHDDRPAAKRKLHALAEKYDQPYLLESYYFVL GT:EXON 1|1-420:0| BL:SWS:NREP 1 BL:SWS:REP 1->417|UVSE_CLOPE|4e-68|35.6|404/412| BL:PDB:NREP 1 BL:PDB:REP 3->287|3bzgA|2e-39|37.4|270/277| RP:PDB:NREP 1 RP:PDB:REP 37->291|3c0sA|3e-28|41.8|237/277| RP:PFM:NREP 2 RP:PFM:REP 7->260|PF03851|1e-51|43.0|251/273|UvdE| RP:PFM:REP 315->417|PF08349|9e-10|35.9|103/117|DUF1722| HM:PFM:NREP 2 HM:PFM:REP 27->262|PF03851|1.9e-63|34.7|236/276|UvdE| HM:PFM:REP 315->418|PF08349|4.1e-13|25.0|104/117|DUF1722| GO:PFM:NREP 2 GO:PFM GO:0004519|"GO:endonuclease activity"|PF03851|IPR004601| GO:PFM GO:0006289|"GO:nucleotide-excision repair"|PF03851|IPR004601| RP:SCP:NREP 1 RP:SCP:REP 126->183|1to0A|4e-04|27.6|58/148|c.116.1.3| HM:SCP:REP 41->220|4xiaA_|3.7e-14|32.5|169/0|c.1.15.3|1/1|Xylose isomerase-like| OP:NHOMO 173 OP:NHOMOORG 148 OP:PATTERN -------1----------------1---1-----------------1--------------------- --------------------------------------------------------------------------------1-1-----------------------------------------1-----------11111---1---11-----------------111-------------1111------122222222-222222-1--11222--1----------11-----------------------------------------------------1--------------------------1----------11-2-------1111---1111--1-------------1-----------------------------------------------11-11-1-1----------------------------------------------------------------------------------------------------------------------------------------------------------1-1-1-11------------11-------------------------------------------------------------------------------1-------------------------------------------------------------------------------------------------------------------------------------1-----1---------------------------------------------------------------------------------------------------- -------------211111111111111111111-11111-111111111111111111111------------------------11-15111-11-111-1111---1------------------------------------------------------------------11-----11----1--------- ------------------------------------1-------------------------------------------------------------------------------------------------------------------------------------1---- STR:NPRED 379 STR:RPRED 90.2 SQ:SECSTR ##EEEEcEETTTTEEcccccccccccHHHHHHHHHcHHHHHHHHHHHHHHHTccEEEccGGGcTTTTcTTccccHHHHHHHHHHHHHHHHHHTTcEEEEcccTTccTTcccHHHHHHHHHHHHHHHHHHHHTTcTTTcEEEEEccccTTcHHHHHHHHHHHHHTTcTTGGGTEEEEcccccccHHHHHHHHHHHTccEEEEHHHHHHccTcTTccHHHHHHHHGGGccHGcccccEEEccccTTccTTcccccccHHHHHHHHHHcHHccccHccccEEEEEccTTGGGcc####ccTTc##cHHHHHHHHHHHHH###########HHHHHHHHHHHHHHcHHHHHHHHH######TTHHHHT##########cccccTTccHHHHHH#cTTTTTTccHHHHTTccccHHHHHH##### PSIPRED cccccccccccccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEcccccccccccccccccHHHHHHHHHHHHHHHHHHccEEEEccccEEEcccccHHHHHHHHHHHHHHHHHHHHcccccccEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHcEEEEEccccccHHHHHHHHHHHcccEEHHHHHHHHccccccccHHHHHHHHHHHHccccccEEEEEcccccccccccccccccccHHHHHHHHHHccccccccccccEEEEcccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHccccccccHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHcccHHHHHHHHHHHcccHHHcccccccc //