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Francisella tularensis subsp. mediasiatica FSC147 (ftul2)
Gene : ACD30541.1
DDBJ      :             conserved hypothetical membrane protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  19/915 : Eukaryota  63/199 : Viruses  0/175   --->[See Alignment]
b.96.1f.36.1
:351 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   32->291 2vl0A PDBj 3e-19 26.3 %
:RPS:PDB   28->226 3ehzA PDBj 3e-33 23.5 %
:RPS:SCOP  31->226 1i9bA  b.96.1.1 * 7e-14 15.1 %
:HMM:SCOP  30->227 1i9bA_ b.96.1.1 * 3.5e-26 27.1 %
:HMM:SCOP  227->351 1oedA_ f.36.1.1 * 0.00016 21.8 %
:RPS:PFM   32->193 PF02931 * Neur_chan_LBD 8e-14 31.4 %
:HMM:PFM   30->227 PF02931 * Neur_chan_LBD 2.9e-29 25.1 191/216  
:HMM:PFM   235->334 PF02932 * Neur_chan_memb 1.1e-06 21.2 99/237  
:BLT:SWISS 31->291 ELIC_ERWCH 5e-19 26.2 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ACD30541.1 GT:GENE ACD30541.1 GT:PRODUCT conserved hypothetical membrane protein GT:DATABASE GIB00719CH01 GT:ORG ftul2 GB:ACCESSION GIB00719CH01 GB:LOCATION complement(582489..583544) GB:FROM 582489 GB:TO 583544 GB:DIRECTION - GB:PRODUCT conserved hypothetical membrane protein GB:PROTEIN_ID ACD30541.1 GB:DB_XREF GI:187712244 LENGTH 351 SQ:AASEQ MRNIYKIILVLSIVAIFYSDIFGYGDIPPQKPTLVKTSAFITDIQILNEMNEQLQIDVIFRFSWNDQRLEFDKNEEKTPYKLYQGDFQYDEVFEGWKPQISIINEIGTPQIKARQIKIYPNGDIIYTEQRTLHLETPMRLEKFPFDKQTLKAYIIPFGYNSKEVQLIVEPNHKITVKDYVKDHPNINVAEWHLSNFDLKNIEPIKYYYGKPQRISMLEFSISLERKPTNILLKVLIPLTLLVLAMWAIFWMDTKALSDRLNIAFIGILSVIAYQFLIEGEMPDIDYLTFTDGFLLLSFSILFSTVLESLAVYWLIKLNKDKLARKMDIFSRFVFPISYLVLITSLYFIYLH GT:EXON 1|1-351:0| BL:SWS:NREP 1 BL:SWS:REP 31->291|ELIC_ERWCH|5e-19|26.2|244/321| TM:NTM 5 TM:REGION 5->26| TM:REGION 230->252| TM:REGION 261->283| TM:REGION 292->314| TM:REGION 326->348| SEG 230->243|illkvlipltllvl| SEG 293->303|flllsfsilfs| BL:PDB:NREP 1 BL:PDB:REP 32->291|2vl0A|3e-19|26.3|243/306| RP:PDB:NREP 1 RP:PDB:REP 28->226|3ehzA|3e-33|23.5|183/310| RP:PFM:NREP 1 RP:PFM:REP 32->193|PF02931|8e-14|31.4|153/206|Neur_chan_LBD| HM:PFM:NREP 2 HM:PFM:REP 30->227|PF02931|2.9e-29|25.1|191/216|Neur_chan_LBD| HM:PFM:REP 235->334|PF02932|1.1e-06|21.2|99/237|Neur_chan_memb| GO:PFM:NREP 3 GO:PFM GO:0005230|"GO:extracellular ligand-gated ion channel activity"|PF02931|IPR006202| GO:PFM GO:0006810|"GO:transport"|PF02931|IPR006202| GO:PFM GO:0016020|"GO:membrane"|PF02931|IPR006202| RP:SCP:NREP 1 RP:SCP:REP 31->226|1i9bA|7e-14|15.1|179/205|b.96.1.1| HM:SCP:REP 30->227|1i9bA_|3.5e-26|27.1|181/205|b.96.1.1|1/1|Nicotinic receptor ligand binding domain-like| HM:SCP:REP 227->351|1oedA_|0.00016|21.8|124/227|f.36.1.1|1/1|Neurotransmitter-gated ion-channel transmembrane pore| OP:NHOMO 507 OP:NHOMOORG 82 OP:PATTERN -------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------1-111--------------1-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11-1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11---------------------------------------------------------------------------------------------------------------------------------------------111111111---------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------1--IOKCFJE3263275DB1B2ISB-98F4523D-7B837354732F387771483F7517125395------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 298 STR:RPRED 84.9 SQ:SECSTR ################HHHHHHccccccccccEEEEEcEEEEEEEEEETTTTEEEEEEEEEEEEEcGGGcccTTTcccccEEccTTcccccGGTcccccEEccccccccEEEEEEEEEcTTcEEEEEEEEEEEEEccccGGGGGGcEEEEEEccEEEcccccEEEEEcGGGcccGGGccccccTTcccTTEEEEEEEcEEEEEEEEEcccccEEEEEEEEEEEEEccHHHHHHTHHHHHHHHHHHHTTcccccHcHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHT##################################### PSIPRED cccEEEEEEEEEHHHHHcccccccccccccccEEEEEEEEEEEEEcccccEEEEEEEEEEEEEEEccccccccccccccEEEEEccccccHHcccccccEEEEccccccccEEEEEEEEcccEEEEEEEEEEEEEEEEEEEcccccccEEEEEEEEEcccccEEEEEEcccccEEEccccccccccccccEEEEEEEEccEEEEEEEcccccEEEEEEEEEEEEEccHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEc //