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Francisella tularensis subsp. mediasiatica FSC147 (ftul2)
Gene : ACD30976.1
DDBJ      :             rRNA methylase, SpoU family
Swiss-Prot:             

Homologs  Archaea  57/68 : Bacteria  476/915 : Eukaryota  9/199 : Viruses  0/175   --->[See Alignment]
c.116.1
:247 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   7->245 3ilkB PDBj 3e-38 46.3 %
:RPS:PDB   6->164 3dcmX PDBj 4e-23 15.8 %
:RPS:SCOP  6->164 1gz0A1  c.116.1.1 * 5e-23 21.0 %
:HMM:SCOP  7->196 1v2xA_ c.116.1.1 * 3e-33 29.5 %
:RPS:PFM   10->159 PF00588 * SpoU_methylase 5e-06 33.3 %
:HMM:PFM   8->159 PF00588 * SpoU_methylase 2.7e-32 34.6 133/142  
:HMM:PFM   136->197 PF04501 * Baculo_VP39 0.00075 24.2 62/300  
:BLT:SWISS 4->247 TRMJ_YERPS 1e-56 47.9 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ACD30976.1 GT:GENE ACD30976.1 GT:PRODUCT rRNA methylase, SpoU family GT:DATABASE GIB00719CH01 GT:ORG ftul2 GB:ACCESSION GIB00719CH01 GB:LOCATION complement(1148146..1148889) GB:FROM 1148146 GB:TO 1148889 GB:DIRECTION - GB:PRODUCT rRNA methylase, SpoU family GB:PROTEIN_ID ACD30976.1 GB:DB_XREF GI:187712679 LENGTH 247 SQ:AASEQ MNNLFNNIRIVLVEPSHSGNVGSTARAMLNMGLTNLWLVNPKKGIDDEALALSCHATEVVNNATIVANLEEALEGVDYVVGTSARVRRVSLPIEPISKVATSILNKIQKSDEKIAILFGRERTGLLNEELLMSNVHAYIPSNEEYTSLNLAQAVQLVAYEIYKQAIEISKLKQVPEYNHLHKKASVKELQGLYQHFEDSMIKSGFLDKDKPGHVMDKVRRLFQRSELESQEVNILRGFLTSLENQDK GT:EXON 1|1-247:0| BL:SWS:NREP 1 BL:SWS:REP 4->247|TRMJ_YERPS|1e-56|47.9|242/257| BL:PDB:NREP 1 BL:PDB:REP 7->245|3ilkB|3e-38|46.3|218/226| RP:PDB:NREP 1 RP:PDB:REP 6->164|3dcmX|4e-23|15.8|158/188| RP:PFM:NREP 1 RP:PFM:REP 10->159|PF00588|5e-06|33.3|135/143|SpoU_methylase| HM:PFM:NREP 2 HM:PFM:REP 8->159|PF00588|2.7e-32|34.6|133/142|SpoU_methylase| HM:PFM:REP 136->197|PF04501|0.00075|24.2|62/300|Baculo_VP39| GO:PFM:NREP 3 GO:PFM GO:0003723|"GO:RNA binding"|PF00588|IPR001537| GO:PFM GO:0006396|"GO:RNA processing"|PF00588|IPR001537| GO:PFM GO:0008173|"GO:RNA methyltransferase activity"|PF00588|IPR001537| RP:SCP:NREP 1 RP:SCP:REP 6->164|1gz0A1|5e-23|21.0|143/166|c.116.1.1| HM:SCP:REP 7->196|1v2xA_|3e-33|29.5|166/191|c.116.1.1|1/1|alpha/beta knot| OP:NHOMO 623 OP:NHOMOORG 542 OP:PATTERN 11111111111111111------1111111111111111111111111111111---111111111-- 111-------------------------------------------------------------------------------------------------------------------------------------111-----1-211111111111111111111111111111111111111111--1----------------------------------------------------------------------------------------------------------------------------------------------------------------1---------------------11-111111111111111111111111111111111-1111111111111111111111111111111111111111111111111111111------------111111111-11-----111111111111111111111111111111111111111111111111111111111111111111111111111111121-111111111-11111112122122-11-------------------------11221121111112111111111111111111---1111------22222212222221222-2222222222222222222222221112222222222222222222222221-111111111111--1111111111112122111111111-111111111111111111111111111111111111111111111111111111111111111111111111111---------------1---------------------------------------- ------------------------------------------------------------------------------------------------------------1-------------------------------------------------------------------2112-21--1-----1------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 235 STR:RPRED 95.1 SQ:SECSTR ##ccccTTccEEcccccHHHHHHHHHHHHHTTccEEEEEcccHHHHHGGGGTccccHHHHTTEEEEccHHHHHHHHHHHHccccEEEEcccccccccccHHHHHHHHHHcccccEEEEEccTTcccHHHHTTccEEccTTTTcccccccHHHHHHHHHHHHTTTHHHHHHTTccTccccc###ccHHHHHHHHHHHHHHHHHTTccccHH####HHHHHHHHHHHTccHHHHHHHHH#HHHHHHH## DISOP:02AL 246-248| PSIPRED ccccccccEEEEEccccccHHHHHHHHHHHccccEEEEccccccccHHHHHHHccccHHccEEEEEccHHHHHHcccEEEEEEccccccccEEEccccHHHHHHHHHHcccccEEEEEccccccccHHHHHHcccEEEEcccccccHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHcc //