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Francisella tularensis subsp. mediasiatica FSC147 (ftul2)
Gene : ACD31042.1
DDBJ      :             DNA-damage inducible protein P
Swiss-Prot:DPO4_FRATM   RecName: Full=DNA polymerase IV;         Short=Pol IV;         EC=2.7.7.7;

Homologs  Archaea  28/68 : Bacteria  711/915 : Eukaryota  187/199 : Viruses  1/175   --->[See Alignment]
d.240.1e.8.1
:349 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   7->338 1t94B PDBj 3e-52 42.9 %
:RPS:PDB   7->336 2asdA PDBj 2e-79 29.3 %
:RPS:SCOP  5->234 1t94A2  e.8.1.7 * 8e-72 45.3 %
:RPS:SCOP  245->338 1unnC  d.240.1.1 * 6e-12 28.6 %
:HMM:SCOP  5->238 1k1sA2 e.8.1.7 * 2.2e-88 44.0 %
:HMM:SCOP  244->349 1unnC_ d.240.1.1 * 4.8e-14 29.5 %
:RPS:PFM   10->156 PF00817 * IMS 1e-29 46.2 %
:RPS:PFM   169->200 PF11798 * IMS_HHH 6e-04 40.6 %
:RPS:PFM   214->323 PF11799 * IMS_C 1e-11 35.5 %
:HMM:PFM   10->157 PF00817 * IMS 1.3e-52 41.9 148/150  
:HMM:PFM   213->326 PF11799 * IMS_C 7.4e-14 29.2 113/135  
:HMM:PFM   168->200 PF11798 * IMS_HHH 4.8e-09 36.4 33/33  
:BLT:SWISS 1->349 DPO4_FRATM 0.0 100.0 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ACD31042.1 GT:GENE ACD31042.1 GT:PRODUCT DNA-damage inducible protein P GT:DATABASE GIB00719CH01 GT:ORG ftul2 GB:ACCESSION GIB00719CH01 GB:LOCATION 1236523..1237572 GB:FROM 1236523 GB:TO 1237572 GB:DIRECTION + GB:PRODUCT DNA-damage inducible protein P GB:PROTEIN_ID ACD31042.1 GB:DB_XREF GI:187712745 LENGTH 349 SQ:AASEQ MTKLRKIIHIDMDYFFAQVEEKANPSLKDKPFAVGGTNPKRGVISTCNYIAREYGVRSAMPTAIAMQKCPNLILLNTDFAKYKAASAVIRDIFYSFTDKVEPLSLDEAYLDVTDVKEYKNSATLIAQAIKQEIFNKTGLTGSAGVAPNKLLAKIASDINKPNGLYVVTPKQVDSFVKDLPVKKLFGVGKVSQEKLKSTGVETCLDLQQLSLATLVDKFGKFGSSLYNYARGIDNREVNPVRIRKSVSVENTYLEDLKTLGACLEKLPSLYDKLTSRITEEHYKSIIGIVVKFTDTKFNKTSLTRVAKILDKEMLKNLIIELHQKQNHPIRLIGIGVKLGEIDDKQIDLF GT:EXON 1|1-349:0| SW:ID DPO4_FRATM SW:DE RecName: Full=DNA polymerase IV; Short=Pol IV; EC=2.7.7.7; SW:GN Name=dinB; OrderedLocusNames=FTM_1155; SW:KW Complete proteome; Cytoplasm; DNA damage; DNA repair; DNA replication;DNA-binding; DNA-directed DNA polymerase; Magnesium; Metal-binding;Mutator protein; Nucleotidyltransferase; Transferase. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->349|DPO4_FRATM|0.0|100.0|349/349| GO:SWS:NREP 9 GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0006974|"GO:response to DNA damage stimulus"|DNA damage| GO:SWS GO:0006281|"GO:DNA repair"|DNA repair| GO:SWS GO:0006260|"GO:DNA replication"|DNA replication| GO:SWS GO:0003677|"GO:DNA binding"|DNA-binding| GO:SWS GO:0003887|"GO:DNA-directed DNA polymerase activity"|DNA-directed DNA polymerase| GO:SWS GO:0046872|"GO:metal ion binding"|Metal-binding| GO:SWS GO:0016779|"GO:nucleotidyltransferase activity"|Nucleotidyltransferase| GO:SWS GO:0016740|"GO:transferase activity"|Transferase| BL:PDB:NREP 1 BL:PDB:REP 7->338|1t94B|3e-52|42.9|312/382| RP:PDB:NREP 1 RP:PDB:REP 7->336|2asdA|2e-79|29.3|328/341| RP:PFM:NREP 3 RP:PFM:REP 10->156|PF00817|1e-29|46.2|145/148|IMS| RP:PFM:REP 169->200|PF11798|6e-04|40.6|32/33|IMS_HHH| RP:PFM:REP 214->323|PF11799|1e-11|35.5|110/123|IMS_C| HM:PFM:NREP 3 HM:PFM:REP 10->157|PF00817|1.3e-52|41.9|148/150|IMS| HM:PFM:REP 213->326|PF11799|7.4e-14|29.2|113/135|IMS_C| HM:PFM:REP 168->200|PF11798|4.8e-09|36.4|33/33|IMS_HHH| GO:PFM:NREP 3 GO:PFM GO:0003684|"GO:damaged DNA binding"|PF00817|IPR001126| GO:PFM GO:0003887|"GO:DNA-directed DNA polymerase activity"|PF00817|IPR001126| GO:PFM GO:0006281|"GO:DNA repair"|PF00817|IPR001126| RP:SCP:NREP 2 RP:SCP:REP 5->234|1t94A2|8e-72|45.3|225/308|e.8.1.7| RP:SCP:REP 245->338|1unnC|6e-12|28.6|91/111|d.240.1.1| HM:SCP:REP 5->238|1k1sA2|2.2e-88|44.0|234/0|e.8.1.7|1/1|DNA/RNA polymerases| HM:SCP:REP 244->349|1unnC_|4.8e-14|29.5|105/0|d.240.1.1|1/1|Lesion bypass DNA polymerase (Y-family), little finger domain| OP:NHOMO 1771 OP:NHOMOORG 927 OP:PATTERN ------1111111111--------11111111-----------1--11-2122--------1----11 211-211111111123322-23--242222223333323311-123121111243111--1131112111111111112133------2211-111---21512233212--------------1--------1-2-----111--4--------11-----1-1---1--1-11111-11-1--------2-22323313113121212222232312-2222221121122222222222222222222226112222121122112311223121121111112111111111111211112111111112112222111121111111111-1-21111111211221-211321-12221111111111-13111-----212232111121111111111112-23123112231-1222221222241111111111111111111111111121211-----------------------------11111-111111111111111111211111111111111-111112111111211111-11511111111112111111221121112111-212112123112111221--11---------------1-11122311121111111222312112221211121----111------22111212222222322-22232222222222222224321111222121312314433232-112221--211111111211---21-1114332-2122111111-----11112123111-111-111113111112211231-1111-1--211111121111212111111121------2-11--11--------1-3----1-1111111111111111111-1--------211 ----113-74B211434334424433422323334322231332223244333433443444111111-11-11111-1111111123-23242222222-23331-282744446C4443444AB394Ad5-66834344344444234443A2635431425543433D34832432I3323323753454233332 ------------------------------------------------------------------------------------------------------------------------------1------------------------------------------------ STR:NPRED 348 STR:RPRED 99.7 SQ:SECSTR #cccccEEEEEETTHHHHHHHHHcGGGTTccEEEEEEccccEEEEEEcHHHHTTTccTTccHHHHHHHcTTcEEEEccHHHHHHHHHHHHHHHTTTcccEEEEETTEEEEEcTTTcccHHHHHHHHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHHccccEEEccHHHHHHHHHHccGGGcTTccHHHHHHHHHTTcccGGGGGcccHHHHHHHHcHHHHHHHHHHTTcccccccccccccEEEEEEEEEEEEccHHHHHHHHHHHHHHHHHHHTTccEEEEEEEEEEETTccEEEEEEEccccccHHHHHHHHHHHHHHHccccEEEEEEEEHHHHHTTEEEccc PSIPRED cccccEEEEEEccHHHHHHHHHHcccccccEEEEEEcccccEEEEEccHHHHHHcccccccHHHHHHHcccEEEEcccHHHHHHHHHHHHHHHHHHcccEEEcccccEEEEcccHHHHcccHHHHHHHHHHHHHHHccccEEEEEcccHHHHHHHHHHcccccEEEEcHHHHHHHHHHccHHHHccccHHHHHHHHHcccccHHHHHHccHHHHHHHHHHHHHHHHHHHccccccccccccccccEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEEEEcccEEEEEEEEccccccHHHHHHHHHHHHHHcccccEEEEEEEEcccccccccccc //