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Francisella tularensis subsp. mediasiatica FSC147 (ftul2)
Gene : deaD
DDBJ      :deaD         DEAD-box subfamily ATP-dependent helicase
Swiss-Prot:             

Homologs  Archaea  48/68 : Bacteria  828/915 : Eukaryota  198/199 : Viruses  1/175   --->[See Alignment]
c.37.1
:569 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   9->350 2db3A PDBj 3e-62 38.2 %
:RPS:PDB   1->419 1cu1A PDBj 1e-65 10.6 %
:RPS:SCOP  19->353 1pjrA1  c.37.1.19 * 2e-51 10.3 %
:HMM:SCOP  5->127 1z3iX1 c.37.1.19 * 3.3e-06 26.5 %
:HMM:SCOP  76->366 1wp9A2 c.37.1.19 * 5.5e-73 37.8 %
:RPS:PFM   31->194 PF00270 * DEAD 3e-35 46.3 %
:RPS:PFM   272->342 PF00271 * Helicase_C 1e-16 45.1 %
:RPS:PFM   499->566 PF03880 * DbpA 6e-10 36.8 %
:HMM:PFM   31->199 PF00270 * DEAD 2.4e-54 45.5 165/167  
:HMM:PFM   267->343 PF00271 * Helicase_C 8.4e-32 49.4 77/78  
:HMM:PFM   496->567 PF03880 * DbpA 2.9e-23 34.7 72/74  
:BLT:SWISS 3->566 DEAD_KLEPN e-107 42.5 %
:PROS 157->165|PS00039|DEAD_ATP_HELICASE
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ACD30717.1 GT:GENE deaD GT:PRODUCT DEAD-box subfamily ATP-dependent helicase GT:DATABASE GIB00719CH01 GT:ORG ftul2 GB:ACCESSION GIB00719CH01 GB:LOCATION 805471..807180 GB:FROM 805471 GB:TO 807180 GB:DIRECTION + GB:GENE deaD GB:PRODUCT DEAD-box subfamily ATP-dependent helicase GB:PROTEIN_ID ACD30717.1 GB:DB_XREF GI:187712420 GB:GENE:GENE deaD LENGTH 569 SQ:AASEQ MNSETKKDFSQLGLNQDIIDTVIKLGYENPTPIQQYAIPYILSGRDVLGQAQTGTGKTAAFALPLINNMDLASRDRAPQVLVLAPTRELAIQVAEQFEAFAKNVPNLDVACIYGGQEYGSQIRALKQGVKVVVGTTGRVMDHIEKGTLQLDNLRALVLDEADEMLRMGFIDDVKFVLSHVSEQCQRLLFSATIPTDIADIIEEYLRNPCKIQVKAKTKTANTVTQKFIVIKGFRKIDALDRLLETEETDGVIIFVKTKTSTIEVADNLKALGYKVAAINGDMQQSQREYIVDQFRSAKSDILVATDVVARGIDLERISHVINYDMPNDTDTYVHRIGRTGRAGREGTSISLVPLKEMRFLRTLERFTGSPMQEVFMPSAKDLAQSRVEHFKARIISALDKNKSLDKYKEIITSIRDELQLDSEELLAGLTLLAQGKKTFFPREIQAKEEKPARDNRNSRDGRRNERFERRNDQGDRTKRFDKADRKPRRAVNIDLTTYKLDVGHDNDVQARNIVGAIANEGNIDSKHICNISIQKDYTLVDLPANLSPKVINHLKKVWVAGKKLNLTAQ GT:EXON 1|1-569:0| BL:SWS:NREP 1 BL:SWS:REP 3->566|DEAD_KLEPN|e-107|42.5|555/643| PROS 157->165|PS00039|DEAD_ATP_HELICASE|PDOC00039| SEG 128->139|gvkvvvgttgrv| SEG 212->226|qvkaktktantvtqk| SEG 453->472|rdnrnsrdgrrnerferrnd| BL:PDB:NREP 1 BL:PDB:REP 9->350|2db3A|3e-62|38.2|340/420| RP:PDB:NREP 1 RP:PDB:REP 1->419|1cu1A|1e-65|10.6|376/645| RP:PFM:NREP 3 RP:PFM:REP 31->194|PF00270|3e-35|46.3|162/167|DEAD| RP:PFM:REP 272->342|PF00271|1e-16|45.1|71/76|Helicase_C| RP:PFM:REP 499->566|PF03880|6e-10|36.8|68/74|DbpA| HM:PFM:NREP 3 HM:PFM:REP 31->199|PF00270|2.4e-54|45.5|165/167|DEAD| HM:PFM:REP 267->343|PF00271|8.4e-32|49.4|77/78|Helicase_C| HM:PFM:REP 496->567|PF03880|2.9e-23|34.7|72/74|DbpA| GO:PFM:NREP 6 GO:PFM GO:0003676|"GO:nucleic acid binding"|PF00270|IPR011545| GO:PFM GO:0005524|"GO:ATP binding"|PF00270|IPR011545| GO:PFM GO:0008026|"GO:ATP-dependent helicase activity"|PF00270|IPR011545| GO:PFM GO:0003676|"GO:nucleic acid binding"|PF00271|IPR001650| GO:PFM GO:0004386|"GO:helicase activity"|PF00271|IPR001650| GO:PFM GO:0005524|"GO:ATP binding"|PF00271|IPR001650| RP:SCP:NREP 1 RP:SCP:REP 19->353|1pjrA1|2e-51|10.3|312/315|c.37.1.19| HM:SCP:REP 5->127|1z3iX1|3.3e-06|26.5|113/0|c.37.1.19|1/2|P-loop containing nucleoside triphosphate hydrolases| HM:SCP:REP 76->366|1wp9A2|5.5e-73|37.8|270/0|c.37.1.19|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 10435 OP:NHOMOORG 1075 OP:PATTERN ---1--1111111121-1-----1111--1211111111111111121-2112----1111111--12 1111333333332332322-23113322222233333555-42333432554434323--4432333564211112111131-11111555515331--51667389816--------------222122222212111111111121-2111----12122121-2222111111111111131121--1125666666665666666435544665222535455555565233333333333333333434343333433344333334333223333333333333333333323333333333333333333333333-524766666667673533533335-2-121113335-11111-1---113-3323322212333333223433333333333333-4333334323223333333333333324333233333324444444435554323------------111111111111111111333324444355555554444445544443455544452344454644555654554343353222222232244574825253214333-444535545335374424--1-------1111111115111522AB8846D78BBBEEEEEEEEEEECEEDEDD1-2222311111165556666666666666-66666666666566666666665555666666666666565566665666651655667755667114521222444425449323333233333333222222222256666667777666677683222222226AAAA999999CDBB44555555553333232-332222--------11322232---1--11---11121-11111111------34 TQMNWTQ4*SOLSQVOOQONNNNPPOONONNNNNMNNPNNMNNOMNPPNNOOOOMOMONOOOONNNNNGOOMNNNOPKPQNNLMNMMN-MZQONPRSOPNNNPadbBT*U*juhoixYTXOWbVtpQ*W**l3vj*QYXTmUahURaZVTdTNwWhYUaZ*wgZUTXkYf*ikfRLbYg*geZSYum**Q*tWVcXYZb --------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---- STR:NPRED 491 STR:RPRED 86.3 SQ:SECSTR EEEEEEEETTEEEEEEEEEHHHHHHHHHccccccccccccccccEEEEEEccccccTTTHHHHHHHTTTTTcTTcccccEEEEEccHHHHHHHHHHHHHHHHHTTTccEEETccccEEEcccccccccccEEEEEHHHHHHHTcccTTcccEEEEETTTcccHHHHHHHHHHHHHTTTTTccEEEEEEcccTTccccccTTEEEEEcccccccccccccEEcccEEEccHHHHEEETTEEEcGGGTcccEEEEEccccHHHHHHHHHHHHTTccEEEEcTTcccccccccccEEEEEcTTHHHHccccccEEEEccEEEEEEEEcccEEEEEEEEccHHHHHHHHTTcEEEcccccEEEEEccccccccccccHHHHHHHHHHHHHTccccHHHHHHHHHHHHHcTTcccccccHHHHHccHHHHHHHHHTTTTcGGGGTcccGGGccccc###########################GGGGGGTTTGGGcccEEcccccccccccEEcccHHHHHHH################################################### DISOP:02AL 568-570| PSIPRED ccccccccHHHccccHHHHHHHHHcccccccHHHHHHHHHHHccccEEEEEcccccHHHHHHHHHHHHcccccccccEEEEEEcccHHHHHHHHHHHHHHHHHccccEEEEEEccccHHHHHHHHHccccEEEEccHHHHHHHHcccccccccEEEEEEccHHHHccccHHHHHHHHHHccHHHcEEEEEccccHHHHHHHHHHccccEEEEEccccccccccEEEEEEEcHHHHHHHHHHHHHHccccEEEEEEccHHHHHHHHHHHHHccccEEEEEccccHHHHHHHHHHHHcccccEEEEccHHHcccccccccEEEEccccccHHHHccccccccccccccEEEEEEcHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHccccccccccccccccccccccccccccccccHHHcccccccccccccccccccccccccccccEEEEccHHHccccHHHHHHHHHHcccccHHHcccEEEcccccHHHHHHHHHHHHHHHHHcccccccEEEEccc //