[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Francisella tularensis subsp. mediasiatica FSC147 (ftul2)
Gene : deoC
DDBJ      :deoC         deoxyribose-phosphate aldolase
Swiss-Prot:             

Homologs  Archaea  12/68 : Bacteria  514/915 : Eukaryota  103/199 : Viruses  0/175   --->[See Alignment]
c.1.10
:253 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   34->210 1p1xB PDBj 1e-33 40.3 %
:RPS:PDB   15->211 2a4aB PDBj 3e-20 40.6 %
:RPS:SCOP  12->211 1n7kA  c.1.10.1 * 8e-43 28.4 %
:HMM:SCOP  6->247 2a4aA1 c.1.10.1 * 2.3e-64 39.0 %
:RPS:PFM   20->211 PF01791 * DeoC 3e-31 43.1 %
:HMM:PFM   18->236 PF01791 * DeoC 3.3e-45 37.1 202/236  
:BLT:SWISS 20->234 DEOC_HAEDU 2e-40 41.1 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ACD30264.1 GT:GENE deoC GT:PRODUCT deoxyribose-phosphate aldolase GT:DATABASE GIB00719CH01 GT:ORG ftul2 GB:ACCESSION GIB00719CH01 GB:LOCATION 195601..196362 GB:FROM 195601 GB:TO 196362 GB:DIRECTION + GB:GENE deoC GB:PRODUCT deoxyribose-phosphate aldolase GB:PROTEIN_ID ACD30264.1 GB:DB_XREF GI:187711967 GB:GENE:GENE deoC LENGTH 253 SQ:AASEQ MVNQSLGLAMITKQEIVSLIDLTQLGDSDTQVDIVNLCSKARNSLGEVAALCVYKQFIPVVKKQLGNNFKVATVVNFPNGDNTIEDVISEVKQALSLGADEIDLVIDYKEYLDQGFSEKSCQMMVEVKKLCKDKTFKVIIESGELKTAKLITKVCQDVIDAGADFIKTSTGKTSEGATLAAAQVILETIKSSAKRIGFKASGGIRNYNQAVAYIELAANILANNFINPQTFRFGVSGLLDNLLNEQQEQIDDY GT:EXON 1|1-253:0| BL:SWS:NREP 1 BL:SWS:REP 20->234|DEOC_HAEDU|2e-40|41.1|214/258| SEG 212->227|ayielaanilannfin| SEG 238->249|lldnllneqqeq| BL:PDB:NREP 1 BL:PDB:REP 34->210|1p1xB|1e-33|40.3|176/251| RP:PDB:NREP 1 RP:PDB:REP 15->211|2a4aB|3e-20|40.6|197/247| RP:PFM:NREP 1 RP:PFM:REP 20->211|PF01791|3e-31|43.1|188/215|DeoC| HM:PFM:NREP 1 HM:PFM:REP 18->236|PF01791|3.3e-45|37.1|202/236|DeoC| GO:PFM:NREP 1 GO:PFM GO:0016829|"GO:lyase activity"|PF01791|IPR002915| RP:SCP:NREP 1 RP:SCP:REP 12->211|1n7kA|8e-43|28.4|190/234|c.1.10.1| HM:SCP:REP 6->247|2a4aA1|2.3e-64|39.0|241/0|c.1.10.1|1/1|Aldolase| OP:NHOMO 706 OP:NHOMOORG 629 OP:PATTERN 1-1111----------1---------------1-1----------------------1111------- 111-1111111111--------1112-----11---1111-111-11-111-111111--1112111111--------1---11--1111211111---111-2-1-11-------------------------1-11122---1-11111111-11-------11-1111------------111--111-1111111111111111111221111111112111111111112222222222222211111111-23-1--1-111111----11111111111111111111111111111111111111111---1111111131111111111111111111122111111111111111-1111--11-1-------------1------------------1-11-11-1111--122111122111-----1111111111--------------1------------------------------------------1111--1-11--111111-11-2-------------------1-------1--------------1---1-1---1-----------1---1-11-----------------------------211---11-111111111111111111111--1----------11111111111111111-1111111111111111111212221121111111111111111211111111-222222222222----111111111--11-1111111111-1111--------------------------112111111111-11111111111112-----------------1--------------111----2-1111111111111111111-1111-1-1-11- 11-1--1-3111---11--111122221111111111---111111---1-11------111------------------------------1--1-1----1111-1-1212111--11-11-1111-361-1131--111111-11--1111-111-11111111111-1112-------------------121-- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 211 STR:RPRED 83.4 SQ:SECSTR cccEEEEcTTTccEHHHTTEEEEcccTTccHHHHHHHHHHTTcccccccEEEEcGGGHHHHHHHHHHHccEEEEEcTTTccccHHHHHHHHHHHHHHTccEEEEEccHHHHHHcHHHHHHHHHHHHHHHHTTTcEEEEEccHHHHccHHHHHHHHHHHHTTTccEEEcccccccccccHHHHHHHHHHHHHHHHTcEEEEEcccccHHHHH########################################## PSIPRED ccccccccccccHHHHHHHHHHHcccccccHHHHHHHHHHHHHHcccEEEEEEcHHHHHHHHHHHcccccEEEEEccccccccHHHHHHHHHHHHHHcccEEEEEccHHHHHHcccHHHHHHHHHHHHHHccccEEEEEEEccccccHHHHHHHHHHHHHHcccEEEEccccccccccHHHHHHHHHHHHHHccccEEEEccccccHHHHHHHHHHHHHHHccccccHHHEEEcHHHHHHHHHHHHHcccccc //