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Francisella tularensis subsp. mediasiatica FSC147 (ftul2)
Gene : dnaX
DDBJ      :dnaX         DNA polymerase III subunit gamma/tau
Swiss-Prot:             

Homologs  Archaea  50/68 : Bacteria  906/915 : Eukaryota  182/199 : Viruses  2/175   --->[See Alignment]
a.80.1c.37.1
:546 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   1->361 3gliG PDBj 5e-94 46.8 %
:RPS:PDB   1->82 3cf2A PDBj 5e-08 15.9 %
:RPS:PDB   71->263 3c58A PDBj 8e-34 13.8 %
:RPS:SCOP  3->242 1jr3A2  c.37.1.20 * 2e-81 61.2 %
:HMM:SCOP  3->242 1jr3A2 c.37.1.20 * 5.5e-61 30.8 %
:HMM:SCOP  243->367 1jr3A1 a.80.1.1 * 4e-20 24.4 %
:RPS:PFM   4->72 PF05496 * RuvB_N 2e-04 32.4 %
:RPS:PFM   45->145 PF05970 * DUF889 1e-04 28.4 %
:RPS:PFM   122->224 PF06068 * TIP49 1e-07 37.3 %
:HMM:PFM   233->361 PF12169 * DNA_pol3_gamma3 2.4e-21 23.3 129/143  
:HMM:PFM   42->170 PF00004 * AAA 5.7e-13 29.5 105/130  
:HMM:PFM   122->224 PF06068 * TIP49 1.8e-08 42.2 102/398  
:HMM:PFM   15->63 PF01078 * Mg_chelatase 0.00036 34.8 46/207  
:BLT:SWISS 1->389 DPO3X_HAEIN 1e-94 47.3 %
:BLT:SWISS 372->538 ATG11_PICGU 4e-04 24.6 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ACD31450.1 GT:GENE dnaX GT:PRODUCT DNA polymerase III subunit gamma/tau GT:DATABASE GIB00719CH01 GT:ORG ftul2 GB:ACCESSION GIB00719CH01 GB:LOCATION 1768325..1769965 GB:FROM 1768325 GB:TO 1769965 GB:DIRECTION + GB:GENE dnaX GB:PRODUCT DNA polymerase III subunit gamma/tau GB:PROTEIN_ID ACD31450.1 GB:DB_XREF GI:187713153 GB:GENE:GENE dnaX LENGTH 546 SQ:AASEQ MSYQALARKYRPQSFAEVAGQQHALNSLVHALETQKVHHAYLFTGTRGVGKTTLGRLLAKCLNCKTGVTAEPCNKCENCVAINNNSFIDLIEIDAASRTGVEETKEILDNIQYMPSQGRYKVYLIDEVHMLSKQSFNALLKTLEEPPEYVKFILATTDYHKIPVTILSRCIQLHLKHISQADIKDQLKIILAKENINSDEQSLEYIAYHAKGSLRDALSLLDQAISFCGGELKQAQIKQMLGIIDSEEVYSIINAIIDNDPKAILPAIKNLALTESSADAVLDRIAEIWFACCIYSFTQSLDAVNDIDVDIINNILAKISIEQAHFLYQLTITAKKDIALAPNFETGVTMAILRLIAFQKKNLIDKTQTSKSNISPIVSKNDINLLKNTFKSEQPKQTVKAVVAQNNDSTASENTQEQSLDKKWFNLLNRIKLKGFTKTLAFNSHLISDNSETFVIHLNEDAKKILELDPQSIAKLQASISEYLNNPSFRLDIKNLAMDKVSTDQKSPAEIKRENAISKIHNDENTKLIKQALAIDIKDQNIILAD GT:EXON 1|1-546:0| BL:SWS:NREP 2 BL:SWS:REP 1->389|DPO3X_HAEIN|1e-94|47.3|383/688| BL:SWS:REP 372->538|ATG11_PICGU|4e-04|24.6|167/1083| SEG 301->317|ldavndidvdiinnila| BL:PDB:NREP 1 BL:PDB:REP 1->361|3gliG|5e-94|46.8|361/373| RP:PDB:NREP 2 RP:PDB:REP 1->82|3cf2A|5e-08|15.9|82/659| RP:PDB:REP 71->263|3c58A|8e-34|13.8|189/269| RP:PFM:NREP 3 RP:PFM:REP 4->72|PF05496|2e-04|32.4|68/232|RuvB_N| RP:PFM:REP 45->145|PF05970|1e-04|28.4|95/133|DUF889| RP:PFM:REP 122->224|PF06068|1e-07|37.3|102/394|TIP49| HM:PFM:NREP 4 HM:PFM:REP 233->361|PF12169|2.4e-21|23.3|129/143|DNA_pol3_gamma3| HM:PFM:REP 42->170|PF00004|5.7e-13|29.5|105/130|AAA| HM:PFM:REP 122->224|PF06068|1.8e-08|42.2|102/398|TIP49| HM:PFM:REP 15->63|PF01078|0.00036|34.8|46/207|Mg_chelatase| GO:PFM:NREP 5 GO:PFM GO:0006281|"GO:DNA repair"|PF05496|IPR008824| GO:PFM GO:0006310|"GO:DNA recombination"|PF05496|IPR008824| GO:PFM GO:0009378|"GO:four-way junction helicase activity"|PF05496|IPR008824| GO:PFM GO:0003678|"GO:DNA helicase activity"|PF06068|IPR010339| GO:PFM GO:0005524|"GO:ATP binding"|PF06068|IPR010339| RP:SCP:NREP 1 RP:SCP:REP 3->242|1jr3A2|2e-81|61.2|240/240|c.37.1.20| HM:SCP:REP 3->242|1jr3A2|5.5e-61|30.8|240/0|c.37.1.20|1/1|P-loop containing nucleoside triphosphate hydrolases| HM:SCP:REP 243->367|1jr3A1|4e-20|24.4|123/126|a.80.1.1|1/1|DNA polymerase III clamp loader subunits, C-terminal domain| OP:NHOMO 2059 OP:NHOMOORG 1140 OP:PATTERN 11-11-1111111111--121221222212211121--11111--11-1-2221-----1-1111-1- 2321223222222233322-23222322222232222222112211322112222222112222222122221111112322122222111111221-112212112111122222222111112112-2113331221222222212411111111111111111133111112111112112111133212222222223222224222222222222232222222222322222222122222223322213122111113322222221112222222222222222222222222222222232222222111222223332222223323222222111232122232233222222222233212123111122222112122111111111111111111-2221222121112111111121111121211111112111111111112212112112121111111111111111111222221211111111122222222222221122222222132211222321333332221221121131223332322122122222111112111122322222222123122121121111111111-111111111112222321222231221212332323223312-1212222222221232122222222222-2222222222222222222111212211-111111111111111222222221222222222222222312222222223323222424333333332222222311232111132221333312222111121112212222222112112221111222111111212222221111111111111112-11111311111111211112211121122111 2112213-411122-3321333324433334233341322212323332232221211323242233432223212333332222132-432332-3212123321112222222121-212214312-473-212-22-311311-1-122-2231222232323121-22322-21-F111-19429293212222- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------2--1- STR:NPRED 361 STR:RPRED 66.1 SQ:SECSTR HHcccHHHHTccccGGGccccHHHHHHHHHHHHTTcccEEEEEEccTTccHHHHHHHHHHHHHGGGTcccHHHHHHHHHHHHHTTccccEEEEccGGTTcHHHHHHHHTTccEEEEEEETTEEEEETEEEEEEcTTTcEEEEEcTTccEEEEEccccEEEEEcTTcccEEEEEEGGGHHHHHHHHTccHHHHccccTTTccHHHHHHHHHTccccHHHHHHTccccccccHHHHHHHHHHTTccTTccGGGccHHHHHHHHHHTHHTcHHcccccTTcHHHHHHHHHHHHHHHHHTTcGGGccTTTTTTHHHHHHHHHccHHHHHHHHHHHHHHHHHTTTcccHHHHHHHHHHHHHHcccc######################################################################################################################################################################################### PSIPRED cccHHHHHHHccccHHHHcccHHHHHHHHHHHHccccccEEEEEccccccHHHHHHHHHHHHccccccccccccccHHHHHHHcccccEEEEEcccccccHHHHHHHHHHHHHHHHHcccEEEEEccHHHccHHHHHHHHHHHHcccccEEEEEEcccHHHccHHHHHEEEEEEcccccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHcccHHHHHHHHHHHHHHHcccccHHHHHHHHccccHHHHHHHHHHHHHccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHcccHHHHHHHHccccccccccEEEEEEcHHHHHHHHccHHHHHHHHHHHHHHHcccEEEEEccccccccHHHHHccHHHHHHHHHHHHHcccHHHHHHHHHHccEEccccEEEcc //