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Francisella tularensis subsp. mediasiatica FSC147 (ftul2)
Gene : gdhA
DDBJ      :gdhA         glutamate dehydrogenase
Swiss-Prot:             

Homologs  Archaea  52/68 : Bacteria  556/915 : Eukaryota  175/199 : Viruses  0/175   --->[See Alignment]
c.2.1c.58.1
:449 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   5->447 1bgvA PDBj e-159 59.1 %
:RPS:PDB   5->447 1bgvA PDBj e-106 60.5 %
:RPS:SCOP  17->204 1hwxA2  c.58.1.1 * 1e-55 28.2 %
:RPS:SCOP  208->447 1aupA1  c.2.1.7 * 3e-54 52.6 %
:HMM:SCOP  4->197 1bgvA2 c.58.1.1 * 4.3e-74 47.4 %
:HMM:SCOP  203->451 1gtmA1 c.2.1.7 * 1.6e-76 43.0 %
:RPS:PFM   5->74 PF05496 * RuvB_N 4e-04 33.3 %
:RPS:PFM   58->186 PF02812 * ELFV_dehydrog_N 7e-45 58.1 %
:RPS:PFM   203->444 PF00208 * ELFV_dehydrog 1e-53 50.2 %
:HMM:PFM   203->447 PF00208 * ELFV_dehydrog 2.9e-86 50.2 239/244  
:HMM:PFM   57->186 PF02812 * ELFV_dehydrog_N 5.7e-48 43.8 130/131  
:BLT:SWISS 5->447 DHE2_CLOSY e-159 59.1 %
:PROS 122->135|PS00074|GLFV_DEHYDROGENASE

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ACD31321.1 GT:GENE gdhA GT:PRODUCT glutamate dehydrogenase GT:DATABASE GIB00719CH01 GT:ORG ftul2 GB:ACCESSION GIB00719CH01 GB:LOCATION 1618968..1620317 GB:FROM 1618968 GB:TO 1620317 GB:DIRECTION + GB:GENE gdhA GB:PRODUCT glutamate dehydrogenase GB:PROTEIN_ID ACD31321.1 GB:DB_XREF GI:187713024 GB:GENE:GENE gdhA LENGTH 449 SQ:AASEQ MNAQKYIDSVIAQVEKRDGHEKEFIQAVKEVFSTLKPALEHNPKYIEENILARMVEPERGISFRVPWVDKDGNIQVNRGYRYQFNGAIGPFKGGIRFHPSVYSGIIKFLGFEQVFKNSLTTLPMGGGKGGADFDPKGKTDAEIMNFCQSFMMELQRHIGPDIDVPAGDIGVGGKEIGYMYGQYRRIRACFENGVLTGKSLESGGSLIRPEATGYGAVFFLDEMLKHDGETLQGKTVVTSGYGNVAWGVCKKVAQLGGKVVTISGSKGFVHDPEGITTDEKIEFLLKIRNGEKTMQDYAKEFNASWHAGQKPWGIKADIAIPAATQNEIDVEDAQKLIDSGVKYVVEASNMPTTNEAIEFLMKKGIILAPGKAANAGGVAVSGLEMSQNSARLSWSAEEVESKLQQIMANIFHACKFASSKYNFGYNLVAGANLAGFEKVAEAMIQQGRY GT:EXON 1|1-449:0| BL:SWS:NREP 1 BL:SWS:REP 5->447|DHE2_CLOSY|e-159|59.1|443/450| PROS 122->135|PS00074|GLFV_DEHYDROGENASE|PDOC00071| BL:PDB:NREP 1 BL:PDB:REP 5->447|1bgvA|e-159|59.1|443/449| RP:PDB:NREP 1 RP:PDB:REP 5->447|1bgvA|e-106|60.5|443/449| RP:PFM:NREP 3 RP:PFM:REP 5->74|PF05496|4e-04|33.3|69/232|RuvB_N| RP:PFM:REP 58->186|PF02812|7e-45|58.1|129/130|ELFV_dehydrog_N| RP:PFM:REP 203->444|PF00208|1e-53|50.2|231/234|ELFV_dehydrog| HM:PFM:NREP 2 HM:PFM:REP 203->447|PF00208|2.9e-86|50.2|239/244|ELFV_dehydrog| HM:PFM:REP 57->186|PF02812|5.7e-48|43.8|130/131|ELFV_dehydrog_N| GO:PFM:NREP 9 GO:PFM GO:0006281|"GO:DNA repair"|PF05496|IPR008824| GO:PFM GO:0006310|"GO:DNA recombination"|PF05496|IPR008824| GO:PFM GO:0009378|"GO:four-way junction helicase activity"|PF05496|IPR008824| GO:PFM GO:0006520|"GO:cellular amino acid metabolic process"|PF02812|IPR006097| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF02812|IPR006097| GO:PFM GO:0055114|"GO:oxidation reduction"|PF02812|IPR006097| GO:PFM GO:0006520|"GO:cellular amino acid metabolic process"|PF00208|IPR006096| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF00208|IPR006096| GO:PFM GO:0055114|"GO:oxidation reduction"|PF00208|IPR006096| RP:SCP:NREP 2 RP:SCP:REP 17->204|1hwxA2|1e-55|28.2|188/208|c.58.1.1| RP:SCP:REP 208->447|1aupA1|3e-54|52.6|230/235|c.2.1.7| HM:SCP:REP 4->197|1bgvA2|4.3e-74|47.4|194/194|c.58.1.1|1/1|Aminoacid dehydrogenase-like, N-terminal domain| HM:SCP:REP 203->451|1gtmA1|1.6e-76|43.0|237/0|c.2.1.7|1/1|NAD(P)-binding Rossmann-fold domains| OP:NHOMO 1060 OP:NHOMOORG 783 OP:PATTERN 111-1111122222411122221-3333112211--------1--1---1113-11121111221111 122--1121121111------1---1------11111144-111-1121--111112-----11-12111111111111111----1-2222-2111--1121331-223---------------11-11----1122222---211111111----------11-12111-1-----1----22222--1212111111111111111252222112222211111111123111111111111111111121----1-----11--11-1-------111111111111111111111-------------1111111111-211-11111111111111111111111211--111-11-1--112-1111-1---2-----1--11211-----11111111112-11---1----1-------21---1-----1111111211---------------------------------------------11131-221221111111111111111111111112222--11111123211-1112--1---112222221111-11-112-1-1-1----1121112122222232211111-----111111111111--1--11-21--111--------1------1-------2111------1-1-1111111111111-111111111111111111122211111221222222222222221111-111-111111111111---2------1-111--1111111-111--1112222222111-111111111111111---1111111111-------------------------------1--------------1-1-------------------------1221211111121 22--111-41-111--1221111111111111111-121111111111111111-1111111111-1111111112222211111111-1--111111111-1111-11212222312111111111113D3-223111121121112-11-13-11232372311-52421141222-----4373671482211112 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 446 STR:RPRED 99.3 SQ:SECSTR ###HHHHHHHHHHHHHHTTTcHHHHHHHHHHHHTTHHHHHTcHHHHHTTHHHHHTcccEEEEEEEEEEcTTccEEEEEEEEEEEEcccccEEEEEEEcTTccHHHHHHHHHHHHHHHHHTcccccEEEEEEccccTTccHHHHHHHHHHHHHHHGGGccTTTEEEEccTTccHHHHHHHHHHHHHHHTcccGGGcccccGGGTccTTTTTHHHHHHHHHHHHHHHHTTcccTTcEEEEccccHHHHHHHHHHHHHTcEEEEEEETTEEEEcTTccccHHHHHHHHHHHHccccTHHHHHHHTcEEEETccGGGccccEEEccccTTcccHHHHHHHHHTTccEEEccccccccHHHHHHHHcTTcEEEcHHHHTTHHHHHHHHHHHHHHHTccccHHHHHHHHHHHHHHHHHHHHHHHHHTTccccHHHHHHHHHHHHHHHHHHHHccc PSIPRED ccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHcHHHccHHHHHHHccccEEEEEEEEEEcccccEEEEEEEEEEEccccccEEccEEEcccccHHHHHHHHHHHHHHHHHccccccccEEEEEcccccccHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHcccccEEEccccHHHccccccccHHHHHHHHHHHHHHHHccccccccEEEEEcccHHHHHHHHHHHHcccEEEEEEcccEEEEccccccHHHHHHHHHHHHHccccccccccccccEEccccccccccccEEEEccccccccHHHHHHHHHcccEEEEEcccccccHHHHHHHHHcccEEEcHHHHccHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHcccc //