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Francisella tularensis subsp. mediasiatica FSC147 (ftul2)
Gene : gyrB
DDBJ      :gyrB         DNA gyrase, B subunit
Swiss-Prot:             

Homologs  Archaea  22/68 : Bacteria  910/915 : Eukaryota  189/199 : Viruses  7/175   --->[See Alignment]
c.52.1d.107.1d.122.1d.14.1d.175.1e.11.1
:803 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   8->378 1ei1A PDBj e-140 70.1 %
:BLT:PDB   412->558 3foeC PDBj 2e-35 60.3 %
:BLT:PDB   728->794 3fofD PDBj 1e-18 58.2 %
:RPS:PDB   18->375 3cwvB PDBj e-106 24.8 %
:RPS:PDB   395->791 1bgwA PDBj 5e-72 18.1 %
:RPS:SCOP  14->217 1aj6A  d.122.1.2 * 3e-19 58.4 %
:RPS:SCOP  201->308 1pyyA3  d.175.1.1 * 1e-23 16.8 %
:RPS:SCOP  296->563 1dc1A  c.52.1.11 * 1e-76 15.8 %
:RPS:SCOP  669->803 1eq6A  d.107.1.1 * 2e-28 10.4 %
:HMM:SCOP  5->221 1ei1A2 d.122.1.2 * 1.1e-71 52.1 %
:HMM:SCOP  222->393 1kijA1 d.14.1.3 * 1.1e-59 56.4 %
:HMM:SCOP  395->799 1bjtA_ e.11.1.1 * 7.4e-93 56.5 %
:RPS:PFM   222->379 PF00204 * DNA_gyraseB 1e-49 59.2 %
:RPS:PFM   419->522 PF01751 * Toprim 5e-15 47.1 %
:RPS:PFM   730->792 PF00986 * DNA_gyraseB_C 6e-23 69.8 %
:HMM:PFM   222->392 PF00204 * DNA_gyraseB 2.8e-64 54.7 170/173  
:HMM:PFM   730->792 PF00986 * DNA_gyraseB_C 2.2e-32 68.3 63/65  
:HMM:PFM   34->173 PF02518 * HATPase_c 3e-21 35.6 104/111  
:HMM:PFM   420->520 PF01751 * Toprim 3.2e-07 20.5 78/96  
:HMM:PFM   568->635 PF11279 * DUF3080 0.00056 18.2 66/316  
:BLT:SWISS 4->803 GYRB_SALTY 0.0 64.2 %
:PROS 423->431|PS00177|TOPOISOMERASE_II
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ACD31230.1 GT:GENE gyrB GT:PRODUCT DNA gyrase, B subunit GT:DATABASE GIB00719CH01 GT:ORG ftul2 GB:ACCESSION GIB00719CH01 GB:LOCATION complement(1498423..1500834) GB:FROM 1498423 GB:TO 1500834 GB:DIRECTION - GB:GENE gyrB GB:PRODUCT DNA gyrase, B subunit GB:PROTEIN_ID ACD31230.1 GB:DB_XREF GI:187712933 GB:GENE:GENE gyrB LENGTH 803 SQ:AASEQ MSENKAYDSSSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEVVDNAIDEALAGYCDDIKVIINKDGSVSVSDNGRGIPTDIHKEEGRSAAEVILTVLHAGGKFDDSSYKVSGGLHGVGVSVVNALSEQLKLTIYRNGIEHYQEYVHGVPQFPLKEVGSTDETGTLITFKPSKETFSFVDFDYDILMKRIRELSFLNSGVKIELIDKINNRSEIFKYDGGIVAFVKYLNNSKKPIHENVIAVNGIKDDIQVELALQWNDSYKESIFCFTNNIPQRDGGTHLSGLKAAVTRTMNNYIESEGLNKKLKVTLTGEDTREGLAAVLSVKVPDPKFSSQTKDKLVSSDVKSAVESLVNEKLQEFLLENPKEAKIICEKILDSAKAREAARKARDMTRRKGALDIAGLPGKLADCQEKDPALSEIYLVEGDSAGGSAKQARDRKTQAILPLKGKILNVEKARFDKMLGSQEVATLIKALGCGIGAEDYNPDKTRYHKIILMTDADVDGSHIRTLLLTFFYRQMPELVERGYLYIAQPPLYKVKKGKQETYLKDEDALAEYLGNIGLEGACIYLSNGNVISGQVLANYYELYQKSQKVIKKYTKTYPEKLLRIMAYGTKYVDESADISEWWQKIVENCNQKALAYERFKLIETKDIGEDGKENISYGVNHYINGYDTDYIVKSSFFSTKDYEDLVAYGDVLSDISFEGAYVERGAKKEYVDDFESAIDWLLKEARKGNDVQRYKGLGEMNPGQLWETTMDPDNRVLLQVSIKDAVEADALFTTLMGDEVEPRRNFIESNALNVVNLDV GT:EXON 1|1-803:0| BL:SWS:NREP 1 BL:SWS:REP 4->803|GYRB_SALTY|0.0|64.2|796/804| PROS 423->431|PS00177|TOPOISOMERASE_II|PDOC00160| SEG 113->125|vsgglhgvgvsvv| SEG 380->390|akareaarkar| BL:PDB:NREP 3 BL:PDB:REP 8->378|1ei1A|e-140|70.1|371/391| BL:PDB:REP 412->558|3foeC|2e-35|60.3|131/196| BL:PDB:REP 728->794|3fofD|1e-18|58.2|67/199| RP:PDB:NREP 2 RP:PDB:REP 18->375|3cwvB|e-106|24.8|307/311| RP:PDB:REP 395->791|1bgwA|5e-72|18.1|375/679| RP:PFM:NREP 3 RP:PFM:REP 222->379|PF00204|1e-49|59.2|157/169|DNA_gyraseB| RP:PFM:REP 419->522|PF01751|5e-15|47.1|102/110|Toprim| RP:PFM:REP 730->792|PF00986|6e-23|69.8|63/65|DNA_gyraseB_C| HM:PFM:NREP 5 HM:PFM:REP 222->392|PF00204|2.8e-64|54.7|170/173|DNA_gyraseB| HM:PFM:REP 730->792|PF00986|2.2e-32|68.3|63/65|DNA_gyraseB_C| HM:PFM:REP 34->173|PF02518|3e-21|35.6|104/111|HATPase_c| HM:PFM:REP 420->520|PF01751|3.2e-07|20.5|78/96|Toprim| HM:PFM:REP 568->635|PF11279|0.00056|18.2|66/316|DUF3080| GO:PFM:NREP 10 GO:PFM GO:0003677|"GO:DNA binding"|PF00204|IPR013506| GO:PFM GO:0003918|"GO:DNA topoisomerase (ATP-hydrolyzing) activity"|PF00204|IPR013506| GO:PFM GO:0005524|"GO:ATP binding"|PF00204|IPR013506| GO:PFM GO:0005694|"GO:chromosome"|PF00204|IPR013506| GO:PFM GO:0006265|"GO:DNA topological change"|PF00204|IPR013506| GO:PFM GO:0003677|"GO:DNA binding"|PF00986|IPR002288| GO:PFM GO:0003918|"GO:DNA topoisomerase (ATP-hydrolyzing) activity"|PF00986|IPR002288| GO:PFM GO:0005524|"GO:ATP binding"|PF00986|IPR002288| GO:PFM GO:0005694|"GO:chromosome"|PF00986|IPR002288| GO:PFM GO:0006265|"GO:DNA topological change"|PF00986|IPR002288| RP:SCP:NREP 4 RP:SCP:REP 14->217|1aj6A|3e-19|58.4|190/194|d.122.1.2| RP:SCP:REP 201->308|1pyyA3|1e-23|16.8|107/120|d.175.1.1| RP:SCP:REP 296->563|1dc1A|1e-76|15.8|253/310|c.52.1.11| RP:SCP:REP 669->803|1eq6A|2e-28|10.4|134/189|d.107.1.1| HM:SCP:REP 5->221|1ei1A2|1.1e-71|52.1|217/219|d.122.1.2|1/1|ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase| HM:SCP:REP 222->393|1kijA1|1.1e-59|56.4|172/172|d.14.1.3|1/1|Ribosomal protein S5 domain 2-like| HM:SCP:REP 395->799|1bjtA_|7.4e-93|56.5|237/760|e.11.1.1|1/1|Type II DNA topoisomerase| OP:NHOMO 1972 OP:NHOMOORG 1128 OP:PATTERN -----------------------111111111-----------1111111111--------111---- 1111211111111111112-12111311111122221111212122222222222222222222221223222222221111111111222212222112222222222222222222222222211111111111111111111111111111111111111111111111111111111111111111112222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222322222234222222212122222222222221222222222111221122111121111111111113222222222222222222222222222222222-22223222222222222222222222222222222222222222222222222221111111111112222222222222111112222222222222222222222222222222232222222222222222222222221121222222222111222112121111111111111111111111132111111111111111111111111111222222222222222222222222222222221-2222211111122222222222222222-22122222222222222222222222222222222222222222222222221222222222222112222222222222322222222222212222222222222222222222222222222222222222222222222222222222222222222222222212222222222222221211112-22222222222222222221111111111122 22-12211511111211111111111111111111-1111-111111111111111111111111111-1-1111111111-111111-12112111111121111112212223341212222221319F2-426122221223222122-13-422213812121111443123222F2222252391533442222 ---11--------------1----------------1-------------------------------------------------------------------------------------------------------------------------------------111-- STR:NPRED 790 STR:RPRED 98.4 SQ:SECSTR ######ccGGGcccccHHHHHHHcHHHHHccccHHHHHHHHHHHHHHHHHHHHHTTcccEEEEEEcTTccEEEEEEcccHcHHHHHHTcccHHHHHTEEEEEEEEccGccccccTTTTccHHHHHHTEEEEEEEEEEETcccEEEEEETTEEcTcccccccccccEEEEEEEEcTTTcccccccHHHHHHHHHHHHHHcTTcEEEEEETTTTEEEEEEcTTHHHHHHHHHHTTccccccccEEEEEEETTEEEEEEEEEccccccEEEEEETTEEcTTccHHHHHHHHHHHHHHHHHHHHTTHHTccGGGccHHHHTTTEEEEEEEEccGGGcccccTTccccTTHHHHHHHHHHHHHHHHHTTcTTHHHHHTTcHHHHHHHHHHHHHHHTTcHHHHHHHHEcHTTTTTGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcEEEEETTcTTcccEEEcccccTTGGGGEEEEEEETTEEEEEEEEEEETTTTEEEEEEEEEcccccGGGEEEEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHTTcccEEEEEEGGGccEEEEccccccccHHHHHHHHHHHHHHHHHHTTcccccHHHHHHTHHHHHHHHHHHcccTTTcccHHHHHHHHHHHHTTccccEEHHHHHHHHHHHHTcccHHHHHHHHHcccTTcccccTTccccccccGGGTcTTcccTTTcEEcccTTcTTHHHHccGGGGGGcccccETTEEEcTTcccccccccccccHHHHHcEEEEcEEEEccccHHHHHHHHHHHHTTccc####### DISOP:02AL 803-804| PSIPRED ccccccccHHHEEEccccHHHHHccccEEcccccccccHHHHHHHHHHHHHHHHcccccEEEEEEccccEEEEEEccEEcccccccccccEEEEEEEEEEccccccccccEEEccccccccEEEEEEcccEEEEEEEEccEEEEEEEEccEEEccccEEccccccEEEEEEEEcHHHcccccccHHHHHHHHHHHHHHccccEEEEEEcccccEEEEEcccHHHHHHHHHHccccccccccEEEEEEcccEEEEEEEEEccccccEEEEEEccccccccccHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHccEEEEEEEcccccccccccccEEccHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccEEEEEEccccccHHHcccccccEEEEEcccccccHHcccHHHHHccHHHHHHHHHHccccccccccHHHcccccEEEEcccccccHHHHHHHHHHHHHHHHHHHHccEEEEEEccEEEEEEccEEEEEccHHHHHHHHHHHcccccEEEEEcccccccHHHHHHHHHHHcHHHHHHHHHccccHHHHHHHccHHHcccccHHHHHHHHHHHHHHHHHHHHccccEEEEEEEccccccccEEEEEEEEEccccEEEEEEHHHcccHHHHHHHHHHHHHHHHcccccEEEEcccEEEEccHHHHHHHHHHHcccccEEEEEcccccccHHHHHHHccccccEEEEEEEHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHccc //