[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Francisella tularensis subsp. mediasiatica FSC147 (ftul2)
Gene : nth
DDBJ      :nth          endonuclease III
Swiss-Prot:             

Homologs  Archaea  68/68 : Bacteria  871/915 : Eukaryota  151/199 : Viruses  0/175   --->[See Alignment]
a.96.1
:212 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   1->208 2abkA PDBj 3e-65 56.2 %
:RPS:PDB   1->210 2abkA PDBj 3e-55 59.0 %
:RPS:SCOP  1->208 1ornA  a.96.1.1 * 1e-66 43.8 %
:HMM:SCOP  1->211 2abkA_ a.96.1.1 * 7.8e-67 44.1 %
:RPS:PFM   37->163 PF00730 * HhH-GPD 2e-16 40.9 %
:HMM:PFM   34->168 PF00730 * HhH-GPD 6.2e-22 35.3 102/121  
:HMM:PFM   187->203 PF10576 * EndIII_4Fe-2S 2.6e-06 47.1 17/17  
:BLT:SWISS 1->211 END3_HAEIN 4e-69 59.2 %
:PROS 187->203|PS00764|ENDONUCLEASE_III_1
:PROS 102->131|PS01155|ENDONUCLEASE_III_2

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ACD31085.1 GT:GENE nth GT:PRODUCT endonuclease III GT:DATABASE GIB00719CH01 GT:ORG ftul2 GB:ACCESSION GIB00719CH01 GB:LOCATION 1292856..1293494 GB:FROM 1292856 GB:TO 1293494 GB:DIRECTION + GB:GENE nth GB:PRODUCT endonuclease III GB:PROTEIN_ID ACD31085.1 GB:DB_XREF GI:187712788 GB:GENE:GENE nth LENGTH 212 SQ:AASEQ MNKQKRIQIFEIWKQNDPKPTTELEYTSNFELLIAVILSAQATDVGVNKATKVLFKVANTPEQIYALGEQKLAEYIKSIGLYKTKAKNVIATCKDLIEKFDSIVPDNFDDLISLAGVGRKTANVVLNTAFGKPTMAVDTHIFRLANRIPLAKGKNVNEVEKKLLRVIPKEYLHDAHHWIILHGRHICTAQRPRCRNCIIYDYCEFKDKEKYR GT:EXON 1|1-212:0| BL:SWS:NREP 1 BL:SWS:REP 1->211|END3_HAEIN|4e-69|59.2|211/211| PROS 187->203|PS00764|ENDONUCLEASE_III_1|PDOC00615| PROS 102->131|PS01155|ENDONUCLEASE_III_2|PDOC00615| BL:PDB:NREP 1 BL:PDB:REP 1->208|2abkA|3e-65|56.2|208/211| RP:PDB:NREP 1 RP:PDB:REP 1->210|2abkA|3e-55|59.0|210/211| RP:PFM:NREP 1 RP:PFM:REP 37->163|PF00730|2e-16|40.9|127/144|HhH-GPD| HM:PFM:NREP 2 HM:PFM:REP 34->168|PF00730|6.2e-22|35.3|102/121|HhH-GPD| HM:PFM:REP 187->203|PF10576|2.6e-06|47.1|17/17|EndIII_4Fe-2S| GO:PFM:NREP 1 GO:PFM GO:0006284|"GO:base-excision repair"|PF00730|IPR003265| RP:SCP:NREP 1 RP:SCP:REP 1->208|1ornA|1e-66|43.8|208/214|a.96.1.1| HM:SCP:REP 1->211|2abkA_|7.8e-67|44.1|211/211|a.96.1.1|1/1|DNA-glycosylase| OP:NHOMO 1348 OP:NHOMOORG 1090 OP:PATTERN 22111111212222211121111132232122111121111211111112222111111111211111 1111211222111111111-11111111111111111111111111111---111111--1112111111111111111111132333111122112--2321111111111111111111111111111111131211122222-213111122111111111112111111121111111112211111222222221221222112222222222222232222222222222222222222222211212111111-11111111121----2221111111111111111111111111111111111111111111122221111111111111111111311113111111111111111111211111111111111111111111111111111111111-2312212211111111111111111111111111111111111111111111111111111111111111111111111111112211111111111111111111111111111111111111111111111111111111131111111111111111111211221112121211112112111123311111112222211111111111112122121111113111211121111112111112--1121112111111121121111111111-111111111111111111111122212111111111111111111111111111111111111112211111112222112112222112111121111-11111111111111111111111111111111111111221111111111111111111111111111122222211111111111-------------------------2221122122112 11-1231-4111111111--111111-111111111-------11111111111-11---1-1111-1112111122-2211111111-1-11111---111221211212-1111--111-111111-171--1-----11111-1---1--1111-111112111111-1111212292221-3--1-311132221 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 210 STR:RPRED 99.1 SQ:SECSTR ccHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHTTTccHHHHHHHHHHHTTTcccHHHHHHHHHHHHHHHHTTcTTHHHHHHHHHHHHHHHHHHTTTcccccHHHHHHcTTccHHHHHHHHHHHHccccccccHHHHHHHHHHcccccccHHHHHHHHHHHccGGGTTTHHHHHHHHHHHTcccccccGGGcTTGGGcccTTccc## PSIPRED ccHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHccccHHHHHHHHHHHHHHcccHHHHHHccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcccccccHHHHHHcccccHHHHHHHHHHHcccccccccHHHHHHHHHHcccccccHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHcccccccccccccHHHcHHHHccccc //