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Francisella tularensis subsp. mediasiatica FSC147 (ftul2)
Gene : nuoD
DDBJ      :nuoD         NADH dehydrogenase I, D subunit
Swiss-Prot:NUOD_FRATW   RecName: Full=NADH-quinone oxidoreductase subunit D;         EC=1.6.99.5;AltName: Full=NADH dehydrogenase I subunit D;AltName: Full=NDH-1 subunit D;

Homologs  Archaea  67/68 : Bacteria  603/915 : Eukaryota  151/199 : Viruses  0/175   --->[See Alignment]
e.18.1
:417 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   8->417 3iam4 PDBj 2e-85 44.5 %
:RPS:PDB   2->414 3curH PDBj 4e-99 13.9 %
:RPS:SCOP  16->417 2fug41  e.18.1.2 * e-117 44.6 %
:HMM:SCOP  16->417 2fug41 e.18.1.2 * 5.8e-130 44.5 %
:RPS:PFM   120->417 PF00346 * Complex1_49kDa 1e-87 62.6 %
:HMM:PFM   120->167 PF00346 * Complex1_49kDa 3.6e-18 68.8 48/272  
:HMM:PFM   192->417 PF00346 * Complex1_49kDa 2.2e-90 53.3 225/272  
:HMM:PFM   57->112 PF00374 * NiFeSe_Hases 0.00021 23.2 56/507  
:BLT:SWISS 1->417 NUOD_FRATW 0.0 100.0 %
:PROS 43->54|PS00535|COMPLEX1_49K

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ACD30197.1 GT:GENE nuoD GT:PRODUCT NADH dehydrogenase I, D subunit GT:DATABASE GIB00719CH01 GT:ORG ftul2 GB:ACCESSION GIB00719CH01 GB:LOCATION 104527..105780 GB:FROM 104527 GB:TO 105780 GB:DIRECTION + GB:GENE nuoD GB:PRODUCT NADH dehydrogenase I, D subunit GB:PROTEIN_ID ACD30197.1 GB:DB_XREF GI:187711900 GB:GENE:GENE nuoD LENGTH 417 SQ:AASEQ MAEYKNYTLNFGPVHPAAHGVLRLILELDGENVVRADPHVGLLHRGTEKLAEFKPYNQSIGYMDRLDYVSMMCNEHAYVMAIEKLLQLEVPERAKYIRVMFAEMTRILNHLLWVAACGIDLGAMTVFLYAFRVREDLFDCYEAVSGARMHAAYFRPGGVARDLPTQMPQYQKTRFTSKRKAKKLNEPRQGSMLDFLDHFVVDFEKSLDEIDTLLTDNRLWKQRTVDIGTVTAERAKELGFTGPMLRGSGVAWDLRKTQPYEVYHKLEFDIPIGANGDCYDRYLVRMAEMRESNKLIKQCVDWLRANPGPVLSDNHKVAPPKRNAMKNNMEELIHHFKLFSEGYCTTEGEVYVGTEHPKGEFGVYIKSDGANKPYRLKMRAPGFAHISAMDELLSGHMLADTPAIISTIDVVFGDVDR GT:EXON 1|1-417:0| SW:ID NUOD_FRATW SW:DE RecName: Full=NADH-quinone oxidoreductase subunit D; EC=1.6.99.5;AltName: Full=NADH dehydrogenase I subunit D;AltName: Full=NDH-1 subunit D; SW:GN Name=nuoD; OrderedLocusNames=FTW_0109; SW:KW Cell inner membrane; Cell membrane; Complete proteome; Membrane; NAD;Oxidoreductase; Quinone; Transport; Ubiquinone. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->417|NUOD_FRATW|0.0|100.0|417/417| GO:SWS:NREP 7 GO:SWS GO:0005886|"GO:plasma membrane"|Cell inner membrane| GO:SWS GO:0005886|"GO:plasma membrane"|Cell membrane| GO:SWS GO:0016020|"GO:membrane"|Membrane| GO:SWS GO:0016491|"GO:oxidoreductase activity"|Oxidoreductase| GO:SWS GO:0055114|"GO:oxidation reduction"|Oxidoreductase| GO:SWS GO:0048038|"GO:quinone binding"|Quinone| GO:SWS GO:0006810|"GO:transport"|Transport| PROS 43->54|PS00535|COMPLEX1_49K|PDOC00521| BL:PDB:NREP 1 BL:PDB:REP 8->417|3iam4|2e-85|44.5|375/378| RP:PDB:NREP 1 RP:PDB:REP 2->414|3curH|4e-99|13.9|380/545| RP:PFM:NREP 1 RP:PFM:REP 120->417|PF00346|1e-87|62.6|254/254|Complex1_49kDa| HM:PFM:NREP 3 HM:PFM:REP 120->167|PF00346|3.6e-18|68.8|48/272|Complex1_49kDa| HM:PFM:REP 192->417|PF00346|2.2e-90|53.3|225/272|Complex1_49kDa| HM:PFM:REP 57->112|PF00374|0.00021|23.2|56/507|NiFeSe_Hases| GO:PFM:NREP 4 GO:PFM GO:0016651|"GO:oxidoreductase activity, acting on NADH or NADPH"|PF00346|IPR001135| GO:PFM GO:0048038|"GO:quinone binding"|PF00346|IPR001135| GO:PFM GO:0051287|"GO:NAD or NADH binding"|PF00346|IPR001135| GO:PFM GO:0055114|"GO:oxidation reduction"|PF00346|IPR001135| RP:SCP:NREP 1 RP:SCP:REP 16->417|2fug41|e-117|44.6|370/370|e.18.1.2| HM:SCP:REP 16->417|2fug41|5.8e-130|44.5|375/0|e.18.1.2|1/1|HydB/Nqo4-like| OP:NHOMO 1167 OP:NHOMOORG 821 OP:PATTERN 11313111111111113112222121121311212222222222122411223132242531111-11 22213---------11122-21--11212221111111112111-1--1-----------22122112221--------21112322311111---1--1-11--22211--------------1111111111213333333331111111111111111111112111111111111111111111--1-1-111111111111111------111111----------1-------------------------------------------------------------------------------------------1---1----------2-------1-1--2--112221----22--211--23-111111111212112112432311111111111-11111111111111112222212221111111222211111111111322-12231111111111111111111111111111111111-111111111111111111121111111111111111111111111231111111111111111111121111-1-2---342223-433233317222213-2122211111111111111111241211221---------------------1----11--211111111122222213332322233-3333322333323333333222211122222222222222222233332231-21111111111111111111111112--1-----1----------11111111111-1111111111111-1111111111111--------------12111111111111112-112211------------------------------------121111-11-251 ------1-----11111111111111111111111111111111111111111111111111111----1--111------11111---12111241111111112-11-222112-1111111221212B1-1121111111111111-111111-111211116222121232111--------2131-3------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 416 STR:RPRED 99.8 SQ:SECSTR #cccccEEEEEccccccHcccEEEEEEEETTEEEEEEEETEcccccHHHHHTTccGGGHHHHHHTTccTTTTHHHHHHHHHHHHHTTccccHHHHHHHHHHHHHHHHHHHHHHHHHTGGGTccTGGGGHHHHHHHHHHHHHHTcccGGGTTcTTTTccTTccccHHHHHHTccHHHHHHHGGGcccccGGGHHHHHHTHHHHHHHHHHHHHHHHHccccccccEETTTEEccGGGGcHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTGGGGGccccccEEEccEEEcccccHHHHHHHEEEcHHcEEEcTTcTTccccccHHGGGEEEEcTTccccTTcTTcGGGccGGGcccccccccTTcTTccccccEEEETTccccccHHHHHHHTTcHHHHHHHHHHHHHTTccGGGcHH PSIPRED ccccEEEEEEcccccccccccEEEEEEEEccEEEEEEEEcccccHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHcccccccccEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHEccccEEEEcHHHHHHcccccEEHHHcccccccccccccHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHccHHHHHHHccccccccccccccEEEEEEccccEEEEEEEEcccccEEEEEEcccccccHHHHHHHHccccccHHHHHHHHcccccccccc //