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Francisella tularensis subsp. mediasiatica FSC147 (ftul2)
Gene : nupC1
DDBJ      :nupC1        nucleoside permease NupC
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  326/915 : Eukaryota  118/199 : Viruses  0/175   --->[See Alignment]
:399 amino acids
:PSIPRED
:RPS:PFM   10->84 PF01773 * Nucleos_tra2_N 4e-06 34.7 %
:RPS:PFM   194->399 PF07662 * Nucleos_tra2_C 3e-24 31.9 %
:HMM:PFM   194->398 PF07662 * Nucleos_tra2_C 5.4e-63 38.3 201/208  
:HMM:PFM   10->84 PF01773 * Nucleos_tra2_N 9.8e-25 38.7 75/75  
:BLT:SWISS 19->398 NUPC_BACSU 7e-86 45.2 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ACD30265.1 GT:GENE nupC1 GT:PRODUCT nucleoside permease NupC GT:DATABASE GIB00719CH01 GT:ORG ftul2 GB:ACCESSION GIB00719CH01 GB:LOCATION 196352..197551 GB:FROM 196352 GB:TO 197551 GB:DIRECTION + GB:GENE nupC1 GB:PRODUCT nucleoside permease NupC GB:PROTEIN_ID ACD30265.1 GB:DB_XREF GI:187711968 GB:GENE:GENE nupC1 LENGTH 399 SQ:AASEQ MIIKSLYFILGLIVIYFLAYIWSNNRRNIRYKNLIIILIVQLILAKFMLSTSIGINIINYVNKCFEVLLDSTHIGVEFVFGNLANTKEFIFFFNAAMPIVVMSAVIGILQYFRILQFLVVAIGSILSKVTGMGKLESFDAVSSLSVGQSENFLYYKKIIKYLPSNVLYTMAATAMSTVSIGTAAAYMTIIDPSYVCVAIVMNMFGAFFVLNIINPYEKTKEVTYEFLTDQVEDYERQRFFEMLSEYILDGFKVAIIVCVMIMGYIAFLNLADGIFSSLVGISLRDILGYIFYPIAWILNIHGNEIFLSSQIMGTKIVTNEFVAMQELANHSTQLSQHIKAVVSVFLVSFANFSSIGIIIGAIQALSREASVKVARFSLKILYGAVLVSFLSANIVGFIL GT:EXON 1|1-399:0| BL:SWS:NREP 1 BL:SWS:REP 19->398|NUPC_BACSU|7e-86|45.2|376/393| TM:NTM 9 TM:REGION 2->23| TM:REGION 34->56| TM:REGION 105->127| TM:REGION 167->189| TM:REGION 194->216| TM:REGION 249->271| TM:REGION 278->300| TM:REGION 339->361| TM:REGION 374->396| SEG 34->44|liiilivqlil| SEG 349->362|fanfssigiiigai| RP:PFM:NREP 2 RP:PFM:REP 10->84|PF01773|4e-06|34.7|75/75|Nucleos_tra2_N| RP:PFM:REP 194->399|PF07662|3e-24|31.9|204/211|Nucleos_tra2_C| HM:PFM:NREP 2 HM:PFM:REP 194->398|PF07662|5.4e-63|38.3|201/208|Nucleos_tra2_C| HM:PFM:REP 10->84|PF01773|9.8e-25|38.7|75/75|Nucleos_tra2_N| GO:PFM:NREP 3 GO:PFM GO:0005415|"GO:nucleoside:sodium symporter activity"|PF01773|IPR002668| GO:PFM GO:0006810|"GO:transport"|PF01773|IPR002668| GO:PFM GO:0016020|"GO:membrane"|PF01773|IPR002668| OP:NHOMO 851 OP:NHOMOORG 444 OP:PATTERN -------------------------------------------------------------------- 111--1------1------------------------------------------1----------1--------------------------1------1--111-11--------------------------------------1-------------------1111---------------------13777776775777767113313778---1111------2-23333333333333322222--1----1---1111--311111---111------------------1111111111111---------------1111111111----2222-1-1--------------------------1111-----1---1---1----------------11111111------------------1-1-------------------111----------------------------------11111------1111--1-11--1-1111-11-1---------------------------1----------------11-----1--------1------------------------1-1111111-------53-1--111111222211611121362225-------------23112223332323232-323333234332333333332333222121-1111111111-1423233331-32222221222211--------------2-111111111111111------1---1------------------222222222-444433333233331111111-11-------------------------------------------------------------1- ------------1111111-11111111-----1-111-1-11111--11111-111111111-1----1--1-1------11111---1111111------1313----7312224-21111263111282-221-11121224-21126-13121213563551-421-2213--------------1--------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PSIPRED cHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEEEcccccEEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHcccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc //