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Francisella tularensis subsp. mediasiatica FSC147 (ftul2)
Gene : nusB
DDBJ      :nusB         transcription antitermination factor NusB
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  320/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.79.1
:141 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   7->138 1baq- PDBj 4e-17 35.9 %
:RPS:PDB   7->141 3d3cA PDBj 3e-27 35.1 %
:RPS:SCOP  7->141 1tztA  a.79.1.1 * 5e-23 27.6 %
:HMM:SCOP  3->142 1ey1A_ a.79.1.1 * 1.1e-28 28.8 %
:HMM:PFM   10->135 PF01029 * NusB 1.1e-30 29.4 126/134  
:BLT:SWISS 8->141 NUSB_COLP3 2e-20 34.6 %
:TM

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ACD30595.1 GT:GENE nusB GT:PRODUCT transcription antitermination factor NusB GT:DATABASE GIB00719CH01 GT:ORG ftul2 GB:ACCESSION GIB00719CH01 GB:LOCATION 662753..663178 GB:FROM 662753 GB:TO 663178 GB:DIRECTION + GB:GENE nusB GB:PRODUCT transcription antitermination factor NusB GB:PROTEIN_ID ACD30595.1 GB:DB_XREF GI:187712298 GB:GENE:GENE nusB LENGTH 141 SQ:AASEQ MKTTARARNNARLYAVQALYQKKIADNTFSELKIQYYADNADRHYTDWDLFYRLIDAVKTNQDTIDKYIKENSSNGVESINYVDYAVLQVAIAELIECLENPYQVIIKEYVGICYSMGTEEGYKFINAVLQNLAKSIRGEE GT:EXON 1|1-141:0| BL:SWS:NREP 1 BL:SWS:REP 8->141|NUSB_COLP3|2e-20|34.6|133/138| TM:NTM 1 TM:REGION 79->101| BL:PDB:NREP 1 BL:PDB:REP 7->138|1baq-|4e-17|35.9|131/139| RP:PDB:NREP 1 RP:PDB:REP 7->141|3d3cA|3e-27|35.1|134/138| HM:PFM:NREP 1 HM:PFM:REP 10->135|PF01029|1.1e-30|29.4|126/134|NusB| RP:SCP:NREP 1 RP:SCP:REP 7->141|1tztA|5e-23|27.6|134/141|a.79.1.1| HM:SCP:REP 3->142|1ey1A_|1.1e-28|28.8|139/139|a.79.1.1|1/1|NusB-like| OP:NHOMO 320 OP:NHOMOORG 320 OP:PATTERN -------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------------------------------111--------------------------------------------------111111111111111------111----------------------------------------------------------------------------------------------------------------------------1-------------------------------------11111--1-------1--11111111111---------11--11111111111-1----------------------------------------------------------------------1111111111111111-1111111111111-----11111111-----111111111111--11------------------1------------------------------------------1111111111111111111---111111111-11--111-11111111111111111-11-1111111111111111111111111111111111111111111111111111-1111111111111111111111111-111-11111111111111111111111111111111111111111111111111111111111111111-111111111111------11--111-------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 141 STR:RPRED 100.0 SQ:SECSTR ccccccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHccccTTccHHHHHHHHHHHHTcHHHHHHHHGGGTTTccccccHHHHHHHHHHHHHHHHcTTccHHHHHHHHHHHHHHHccTTHHHHHHHHHHHHHHHHcTTc PSIPRED ccccccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHcccc //