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Francisella tularensis subsp. mediasiatica FSC147 (ftul2)
Gene : parE
DDBJ      :parE         DNA topoisomerase IV, B subunit
Swiss-Prot:             

Homologs  Archaea  22/68 : Bacteria  910/915 : Eukaryota  187/199 : Viruses  9/175   --->[See Alignment]
c.52.1d.122.1d.14.1d.173.1d.175.1e.11.1
:627 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   4->381 1s16A PDBj e-103 46.9 %
:BLT:PDB   407->619 3fofD PDBj 4e-33 42.6 %
:RPS:PDB   47->278 2b3pA PDBj 3e-31 13.2 %
:RPS:PDB   291->603 1dc1B PDBj 1e-70 13.6 %
:RPS:SCOP  1->177 1j6rA  d.173.1.2 * 1e-38 12.5 %
:RPS:SCOP  205->303 1pyyA3  d.175.1.1 * 5e-08 7.2 %
:RPS:SCOP  291->603 1dc1A  c.52.1.11 * 3e-71 13.6 %
:HMM:SCOP  3->215 1s16A2 d.122.1.2 * 2.1e-63 41.3 %
:HMM:SCOP  216->382 1s16A1 d.14.1.3 * 1e-41 33.5 %
:HMM:SCOP  388->620 1bjtA_ e.11.1.1 * 2.1e-80 46.5 %
:RPS:PFM   217->383 PF00204 * DNA_gyraseB 9e-20 33.3 %
:RPS:PFM   412->513 PF01751 * Toprim 2e-06 36.0 %
:RPS:PFM   557->618 PF00986 * DNA_gyraseB_C 8e-16 57.4 %
:HMM:PFM   217->384 PF00204 * DNA_gyraseB 5.7e-47 38.3 167/173  
:HMM:PFM   556->618 PF00986 * DNA_gyraseB_C 1.8e-24 48.4 62/65  
:HMM:PFM   31->168 PF02518 * HATPase_c 2.1e-17 24.0 100/111  
:HMM:PFM   413->509 PF01751 * Toprim 0.00011 20.0 80/96  
:BLT:SWISS 1->626 PARE_PSEAE 0.0 54.3 %
:PROS 416->424|PS00177|TOPOISOMERASE_II
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ACD30304.1 GT:GENE parE GT:PRODUCT DNA topoisomerase IV, B subunit GT:DATABASE GIB00719CH01 GT:ORG ftul2 GB:ACCESSION GIB00719CH01 GB:LOCATION complement(249569..251452) GB:FROM 249569 GB:TO 251452 GB:DIRECTION - GB:GENE parE GB:PRODUCT DNA topoisomerase IV, B subunit GB:PROTEIN_ID ACD30304.1 GB:DB_XREF GI:187712007 GB:GENE:GENE parE LENGTH 627 SQ:AASEQ MQNYNAKSIEVLTGLDPVKKRPGMYTNTENPNHLIQEIIDNSVDEVLAGFASKINITLYEDNSIEVADDGRGMPVDIHPEHKMSGIELIMTKLHSGGKFSNKNYTHSGGLHGVGVSVVNALSTRLEAEIKRDGNVYHIVFEDGFKTKDLEIIDNVGKKNTGTKIRFWPNKKYFDDIKVNFKALKNLLEAKAILCKALTIKYSNEIKKEKLTWHFETGLKGYLDHKLEAETLPAEPFMIDNFSNGDSYLDAVFCWCEDPSESIKNSYVNLIPTPQDGTHVTGLKNGIYDAIKAYIEKNSLSVKNIKITANDSFAQLNYVISVKITNPQFAGQTKEKLSNKDVTNFVATAVKDLLTIWLNQNPDEARQIVENISKVAQKRINADKKTTRKRIMNTTIRLPGKLTDCISSDVNSTELFIVEGDSAGGSAKQARDKNFQAVLPLKGKILNSWELDADTIMNSQEIHNIATAIGVDPDNDDISALRYNKICILADADSDGLHIATLICAMFLKHFRKLIENGHIYIAQPPLFRIDIGKSTFYALDENERDTILTKNSKLPGKVNIMRFKGLGEMNPAQLRESAMDVSSRRLLQLTISDVYDDTEMLDMLLAKKRAKDRRDWLENYGDRASVE GT:EXON 1|1-627:0| BL:SWS:NREP 1 BL:SWS:REP 1->626|PARE_PSEAE|0.0|54.3|624/629| PROS 416->424|PS00177|TOPOISOMERASE_II|PDOC00160| SEG 106->118|hsgglhgvgvsvv| BL:PDB:NREP 2 BL:PDB:REP 4->381|1s16A|e-103|46.9|377/380| BL:PDB:REP 407->619|3fofD|4e-33|42.6|190/199| RP:PDB:NREP 2 RP:PDB:REP 47->278|2b3pA|3e-31|13.2|212/228| RP:PDB:REP 291->603|1dc1B|1e-70|13.6|294/311| RP:PFM:NREP 3 RP:PFM:REP 217->383|PF00204|9e-20|33.3|165/169|DNA_gyraseB| RP:PFM:REP 412->513|PF01751|2e-06|36.0|100/110|Toprim| RP:PFM:REP 557->618|PF00986|8e-16|57.4|61/65|DNA_gyraseB_C| HM:PFM:NREP 4 HM:PFM:REP 217->384|PF00204|5.7e-47|38.3|167/173|DNA_gyraseB| HM:PFM:REP 556->618|PF00986|1.8e-24|48.4|62/65|DNA_gyraseB_C| HM:PFM:REP 31->168|PF02518|2.1e-17|24.0|100/111|HATPase_c| HM:PFM:REP 413->509|PF01751|0.00011|20.0|80/96|Toprim| GO:PFM:NREP 10 GO:PFM GO:0003677|"GO:DNA binding"|PF00204|IPR013506| GO:PFM GO:0003918|"GO:DNA topoisomerase (ATP-hydrolyzing) activity"|PF00204|IPR013506| GO:PFM GO:0005524|"GO:ATP binding"|PF00204|IPR013506| GO:PFM GO:0005694|"GO:chromosome"|PF00204|IPR013506| GO:PFM GO:0006265|"GO:DNA topological change"|PF00204|IPR013506| GO:PFM GO:0003677|"GO:DNA binding"|PF00986|IPR002288| GO:PFM GO:0003918|"GO:DNA topoisomerase (ATP-hydrolyzing) activity"|PF00986|IPR002288| GO:PFM GO:0005524|"GO:ATP binding"|PF00986|IPR002288| GO:PFM GO:0005694|"GO:chromosome"|PF00986|IPR002288| GO:PFM GO:0006265|"GO:DNA topological change"|PF00986|IPR002288| RP:SCP:NREP 3 RP:SCP:REP 1->177|1j6rA|1e-38|12.5|176/197|d.173.1.2| RP:SCP:REP 205->303|1pyyA3|5e-08|7.2|97/120|d.175.1.1| RP:SCP:REP 291->603|1dc1A|3e-71|13.6|294/310|c.52.1.11| HM:SCP:REP 3->215|1s16A2|2.1e-63|41.3|213/213|d.122.1.2|1/1|ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase| HM:SCP:REP 216->382|1s16A1|1e-41|33.5|167/167|d.14.1.3|1/1|Ribosomal protein S5 domain 2-like| HM:SCP:REP 388->620|1bjtA_|2.1e-80|46.5|230/760|e.11.1.1|1/1|Type II DNA topoisomerase| OP:NHOMO 1971 OP:NHOMOORG 1128 OP:PATTERN -----------------------111111111-----------1111111111--------111---- 1111211111111111112-12111311111122221111212122222222222222222222221223222222221111111111222212222112222222222222222222222222211111111111111111111111111111111111111111111111111111111111111111112222222222222222222222222222222222222222222222222222222222222322222222222222222222222222222222222222222222222222222322222234222222212122222222222221222222222111221122111121111111111113222222222222222222222222222222222-22223222222222222222222222222222222222222222222222222221111111111112222222222222111112222222222222222222222222222222232222222222222222222222221121222222222111222112121111111111111111111111122111111111111111111111111111222222222222222222222222222222221-2222211111122222222222222222-22122222222222222222222222222222222222222222222222221222222222222112222222222222322222222222212222222222222222222222222222222222222222222222222222222222222222222222222212222222222222221211112-22222222222222222221111111111122 22-1221162211121111-11111111111111111111-111111111111111111111111111-111111111111-111111-121121111111-1111114212223341212222221319F2-426221121223222222-13-42221281212111--43123222F2222252371533443222 ---11--------------1---------------111------------------------------------------------------------------------------------------------------------------------------------111-- STR:NPRED 627 STR:RPRED 100.0 SQ:SECSTR HccccGGGcccccHHHHHHHcHHHHccHHHHHHHHHHHHHHHHHHHHTTcccEEEEEEcTTccEEEEEEEccccHHHEEEcccHHHHHHTEEEEGGGccccccTTTTccHHHHHHTEEEEEEEEEEEEEEcccccEEEEEETTEEcccccccccccccccEEEEEEEEcTTTcccccccHHHHHHHHHHHHHHcTTcEEEEEETTTTEEEEEEcTTHHHHHHHHHHTccccccccEEEEEEETTEEEEEEEEEEccccccEEEEEEETTEEcTTccHHHHHHHHHHHHHHcGGGGTcTccGGGccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTcccGGGGGGcGGGHHHHHHHTTccHHHHTHHHHHHHTccHHHHHHHHHHHHEcHHHHTTTTTGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcEEEEETTcTTcccEEEcccccTTGGGGEEEEETTEEEEEEEEEEETTTTEEEEEEEEEcccccGGGEEEEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHTTcccEEEGGcEEEccccHHHHHHHHHHHHHTcccEEEETTcHHHHHHccHHHHHHTcTTTcccHHHHHHHHHHHHTTcccc PSIPRED cccccHHHEEEcccccccccccccEEccccccHHHHHHHHHHHHHHHcccccEEEEEEcccccEEEEEccEEcccccccccccEEEEEEEEEEEcccccccccEEEcccccccEEEEEEEcccEEEEEEEEccEEEEEEEEccEEccccEEEccccccccEEEEEEEEcHHHHccccccHHHHHHHHHHHHHcccccEEEEEEEEcccEEEEEEccHHHHHHHHHHcccccccccEEEEEEEcccEEEEEEEEEccccccEEEEEEEccccccccccHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHccEEEEEEEcccccccccccccEEccHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHcEEEEEEcccccccEEcccccccEEEEEccccEEEHHcccHHHHHccHHHHHHHHHHccccccccHHHcccccEEEEcccccccccHHHHHHHHHHHHHHHHHHcccEEEEEccEEEEEEccEEEEEccHHHHHHHHHHHccccccEEEEEccccccccHHHHHHHHHcHHHcEEEEEEcccHHHHHHHHHHHHcccccHHHHHHHHHcccccccc //