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Francisella tularensis subsp. mediasiatica FSC147 (ftul2)
Gene : rnr
DDBJ      :rnr          ribonuclease R
Swiss-Prot:             

Homologs  Archaea  13/68 : Bacteria  783/915 : Eukaryota  197/199 : Viruses  0/175   --->[See Alignment]
b.40.4
:765 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   261->714 2ix0A PDBj 4e-44 32.6 %
:RPS:PDB   39->149 1a8vB PDBj 3e-07 10.7 %
:RPS:PDB   185->726 3bzcA PDBj 8e-58 11.9 %
:RPS:SCOP  116->147 2ja9A1  b.40.4.5 * 1e-04 25.0 %
:RPS:SCOP  260->636 2id0A4  b.40.4.16 * e-112 30.3 %
:RPS:SCOP  639->720 2id0A1  b.40.4.5 * 3e-15 15.9 %
:HMM:SCOP  637->720 1go3E1 b.40.4.5 * 3.5e-16 32.9 %
:RPS:PFM   261->592 PF00773 * RNB 2e-78 47.1 %
:HMM:PFM   261->590 PF00773 * RNB 5.8e-108 42.8 320/326  
:HMM:PFM   639->717 PF00575 * S1 1.3e-08 29.9 67/74  
:HMM:PFM   232->273 PF00071 * Ras 0.00014 23.8 42/162  
:HMM:PFM   115->147 PF08206 * OB_RNB 0.00072 33.3 33/58  
:BLT:SWISS 3->720 RNR_HAEIN e-144 41.9 %
:PROS 559->583|PS01175|RIBONUCLEASE_II
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ACD30396.1 GT:GENE rnr GT:PRODUCT ribonuclease R GT:DATABASE GIB00719CH01 GT:ORG ftul2 GB:ACCESSION GIB00719CH01 GB:LOCATION 382701..384998 GB:FROM 382701 GB:TO 384998 GB:DIRECTION + GB:GENE rnr GB:PRODUCT ribonuclease R GB:PROTEIN_ID ACD30396.1 GB:DB_XREF GI:187712099 GB:GENE:GENE rnr LENGTH 765 SQ:AASEQ MSKYSIHNDPNKDIEAQKYENPIPSRKVILNYIRDVKLPVSIENIANALEIFKKNLFEGLVNRLGAMVRDGQLEKDRSYYNLPEMAPIYITSKVTADRDSRLELFSHTLNTKVGIVSHQAKMVMVGDEVTAKVLGLNKRGRIDAEIKTIVTRAQKTVTGYYYKSFDCDFIKPISKSIISDIVLLPPKQKIEHNSLIEAEIIVYPSISSAAVAKFKQEVEAVSPVKEAMMMTTQKYDLIEQWSKKALRYLDNISDDVVVGNRVDLRNQHFVTIDGEDAKDFDDAVYAHKTKSGSWKLYVAIADVSNYVEKDSALDLDAKRRSTSVYFPGYVIPMLPEKLSNGLCSLRPNEDRYSLVCEMNISKEGKLSRYKFYSAVINSKARLTYTEVAKLLEKKQNTIVENTPELVPNIFDLYELYKVLHQARQERGAIDFDTVETQIILDEHNHIESIVPRHRNDAHRLIEECMLVANVAAAKFTIKHKKTSPFRVHSEPKEDRMETLKKYLAKHGIHLAHGKDGKVTPKALAQMLDSIKDRPDYDDIQMMTLRSMNQAVYSINNDGHFGLAYSEYTHFTSPIRRYPDLVVHRIIKSIIGEYEHGAADYKPSELANICENASDQERNADAASKQVENWLKCYFMQYYIGHILEAQIKHVNGLGLFAELKDMYIEGLIHVSAIPGDYYIYDEAKDILIGKRTHKVYKIGQDITVRVVRADLERIHIDFELYDPHKPFAENSSDKPFAKKTKKLKKAKKKKVRSRKKNKTKAKLAH GT:EXON 1|1-765:0| BL:SWS:NREP 1 BL:SWS:REP 3->720|RNR_HAEIN|e-144|41.9|707/782| PROS 559->583|PS01175|RIBONUCLEASE_II|PDOC00904| SEG 170->181|ikpisksiisdi| SEG 737->764|akktkklkkakkkkvrsrkknktkakla| BL:PDB:NREP 1 BL:PDB:REP 261->714|2ix0A|4e-44|32.6|433/637| RP:PDB:NREP 2 RP:PDB:REP 39->149|1a8vB|3e-07|10.7|103/116| RP:PDB:REP 185->726|3bzcA|8e-58|11.9|529/730| RP:PFM:NREP 1 RP:PFM:REP 261->592|PF00773|2e-78|47.1|327/327|RNB| HM:PFM:NREP 4 HM:PFM:REP 261->590|PF00773|5.8e-108|42.8|320/326|RNB| HM:PFM:REP 639->717|PF00575|1.3e-08|29.9|67/74|S1| HM:PFM:REP 232->273|PF00071|0.00014|23.8|42/162|Ras| HM:PFM:REP 115->147|PF08206|0.00072|33.3|33/58|OB_RNB| GO:PFM:NREP 2 GO:PFM GO:0003723|"GO:RNA binding"|PF00773|IPR001900| GO:PFM GO:0004540|"GO:ribonuclease activity"|PF00773|IPR001900| RP:SCP:NREP 3 RP:SCP:REP 116->147|2ja9A1|1e-04|25.0|32/90|b.40.4.5| RP:SCP:REP 260->636|2id0A4|e-112|30.3|363/381|b.40.4.16| RP:SCP:REP 639->720|2id0A1|3e-15|15.9|82/87|b.40.4.5| HM:SCP:REP 637->720|1go3E1|3.5e-16|32.9|82/0|b.40.4.5|2/2|Nucleic acid-binding proteins| OP:NHOMO 1621 OP:NHOMOORG 993 OP:PATTERN ------------------------11111111-----------11-11----1--------------- 212-11-11111--1---------------------1121-----111----111111----1---11----------1-11111111111111111--1111111111111111111111111222111111111----------733322222222221112221222212122212122122222---1111111111111111111111111111111111111111111111111111111111111111111111111111111111111222111111111111111111111111111111111111111111111111111111111111111111111111111-1-----111111111-11-11111111111111111111111111111111111-11112111121-11111111111111111111111111111111111111-1111------------------------------1111111111111111111111111111111111111112111111111222-11111111111111111111111111122212221122111111111111122-11111111111111111111111111112221221122211111111111111111112-1111-21122222222222222222222-2222222222222222222222222222222222222222222222222222-222222222222--2111111111111321222222222122222111111111112111111111111111112222222221222222222132221111111111111112-2111111--------1-1----1-11111111111111111111111111111-11 3422552-82223322222222232222222222222222222222222222222122223232212112123222111211112223-22222222222222788132694633564232344C8173DT537563322443342342444354444432234722422222422223L4442432152243243441 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 663 STR:RPRED 86.7 SQ:SECSTR ######################################cccHHHHHTccHHHHHHHHHHHTcccGGGccHHHHHHHHHHHHHTTTccEEEEEEEEcccccTTcEEEcTTTTcccHHHHHHHTccTTcEEEEEE#EcccTTccccEEEEET#################################ccHHHHHHHHHHHHHHHHTTcHHHHHHHHHHHHHcEEEEEEcGGGcGGGGGGGGGcEEEEEGGGccHHHHHHHHTcccTcccEEEEEEcccccTTcccHHHHHHHHHTTHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHTccccccccEEEEEccccccEEEEEEcTTccEEEEEGccHHHHHHHHHHHHHHHTccEEEEEccTTHHHHHHHHHHHHHHcHHHHHHHHcHHHHHHcTTccHHHHHHHHHHHHHHcHHHHHTTccGGGGTccTTGGGccHHHHHHHHHHHHHHHHHHHcEETTTccHHHHHTcTTccHHHHHHHHcccccGGGGGGcTTccHHHHHHHGGGEEcTTcccGGGGccccGGGHHHHHHHHHHHTccHHHHTTcHHHHHccGGGTccccccHHHHHHHHHHHHcTTccccccccTTTTcccccccTTccTTcccccEEEEEETTEEEEEccccccEEEEETTTccccccGGGGccHHEEEccHHHHccTTccccccEEEEETTTTEEEEccccccccHHHHHTccc############################## DISOP:02AL 764-766| PSIPRED cccccccccccccccccccccccccHHHHHHHHHHccccccHHHHHHHHccccHHHHHHHHHHHHHHHHcccEEEEcccEEcccccccEEEEEEEEcccccEEEEEcccccEEEEcHHHHcccccccEEEEEEEccccccccccEEEEEEEccccEEEEEEEEEccEEEEEEcccccccEEEEEccccccccccEEEEEEEEccccccccEEEEEEEEcccccccHHHHHHHHHccccccccHHHHHHHHHccccccccccccccccEEEEEccccccccccEEEEEEcccccEEEEEEEcccHHHcccccHHHHHHHHcccEEEccccccccccHHHHHHHHHccccccEEEEEEEEEEcccccEEEEEEEEEEEEccccccHHHHHHHHHcccHHHHHccHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEEEEcccccEEEEEEEccccHHHHHHHHHHHHHHHHHHHHHHccccEEEEccccccHHHHHHHHHHHHHcccEEcccccccccHHHHHHHHHHHHcccHHHHHHHHHHHHccccEEEEcccccHHcccccccccccccccHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEEEccccEEEEEEcccccEEEEEccccccccEEEEccccEEEEEcccEEEEcccEEEEEEEEEEccccEEEEEEccccccccccccccccccccccccccccccccccccccHHHHHcc //