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Francisella tularensis subsp. mediasiatica FSC147 (ftul2)
Gene : rplY
DDBJ      :rplY         50S ribosomal L25p family
Swiss-Prot:RL25_FRATW   RecName: Full=50S ribosomal protein L25;

Homologs  Archaea  0/68 : Bacteria  411/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
b.53.1
:96 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   4->95 1dfuP PDBj 9e-24 50.0 %
:RPS:PDB   4->95 1dfuP PDBj 7e-29 50.0 %
:RPS:SCOP  4->95 1dfuP  b.53.1.1 * 6e-29 50.0 %
:HMM:SCOP  3->96 1dfuP_ b.53.1.1 * 5.4e-29 48.9 %
:RPS:PFM   6->93 PF01386 * Ribosomal_L25p 4e-19 52.3 %
:HMM:PFM   6->93 PF01386 * Ribosomal_L25p 2.3e-34 55.7 88/88  
:BLT:SWISS 1->96 RL25_FRATW 9e-51 100.0 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ACD31063.1 GT:GENE rplY GT:PRODUCT 50S ribosomal L25p family GT:DATABASE GIB00719CH01 GT:ORG ftul2 GB:ACCESSION GIB00719CH01 GB:LOCATION complement(1269109..1269399) GB:FROM 1269109 GB:TO 1269399 GB:DIRECTION - GB:GENE rplY GB:PRODUCT 50S ribosomal L25p family GB:PROTEIN_ID ACD31063.1 GB:DB_XREF GI:187712766 GB:GENE:GENE rplY LENGTH 96 SQ:AASEQ MANFVLKAEKREDLGTGASRRLRRAGKIPAVIYGGEKEAVSVLLDHDKVLHSTEDKAFFSSEITLDIDGKQEKVIIKALQRHPYKVKLIHADFMRV GT:EXON 1|1-96:0| SW:ID RL25_FRATW SW:DE RecName: Full=50S ribosomal protein L25; SW:GN Name=rplY; OrderedLocusNames=FTW_1053; SW:KW Complete proteome; Ribonucleoprotein; Ribosomal protein; RNA-binding;rRNA-binding. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->96|RL25_FRATW|9e-51|100.0|96/96| GO:SWS:NREP 4 GO:SWS GO:0030529|"GO:ribonucleoprotein complex"|Ribonucleoprotein| GO:SWS GO:0005840|"GO:ribosome"|Ribosomal protein| GO:SWS GO:0003723|"GO:RNA binding"|RNA-binding| GO:SWS GO:0019843|"GO:rRNA binding"|rRNA-binding| BL:PDB:NREP 1 BL:PDB:REP 4->95|1dfuP|9e-24|50.0|92/94| RP:PDB:NREP 1 RP:PDB:REP 4->95|1dfuP|7e-29|50.0|92/94| RP:PFM:NREP 1 RP:PFM:REP 6->93|PF01386|4e-19|52.3|88/88|Ribosomal_L25p| HM:PFM:NREP 1 HM:PFM:REP 6->93|PF01386|2.3e-34|55.7|88/88|Ribosomal_L25p| GO:PFM:NREP 5 GO:PFM GO:0003735|"GO:structural constituent of ribosome"|PF01386|IPR020055| GO:PFM GO:0005622|"GO:intracellular"|PF01386|IPR020055| GO:PFM GO:0005840|"GO:ribosome"|PF01386|IPR020055| GO:PFM GO:0006412|"GO:translation"|PF01386|IPR020055| GO:PFM GO:0008097|"GO:5S rRNA binding"|PF01386|IPR020055| RP:SCP:NREP 1 RP:SCP:REP 4->95|1dfuP|6e-29|50.0|92/94|b.53.1.1| HM:SCP:REP 3->96|1dfuP_|5.4e-29|48.9|94/94|b.53.1.1|1/1|Ribosomal protein L25-like| OP:NHOMO 411 OP:NHOMOORG 411 OP:PATTERN -------------------------------------------------------------------- -1---------1-11------1--11-----11111--------1-1-1---1--1------1----1-------111----------------11-------------------------------------------------------------------------------------------------1-------------------1--------1------------------------------------------------------------------------------------------------------1----------------------111----------11--1----1--11-1---1111111-----------11111111111---------1111111111111111--111-111111-----------1-----1-11111111----1111111111111-----11111111111111111111111111111111111111111111111111111111111111-1111111111111-------1----------------1111-1---------------------------111111111111111111111111111111111-111111--11111111111111111-11-1111111111111111111111111111111111111111111111111111-111111111111-111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-11----------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 93 STR:RPRED 96.9 SQ:SECSTR ###cEEEcEEcccccHHHHHHHHHTTEEEEEEEccccccEEEEEEHHHHHHHTTcGGGGTcccEEEETTEEccEEEEEEEEccccccEEEEEEEEc PSIPRED ccEEEEEEEEEcccccHHHHHHHHcccccEEEEccccccEEEEEcHHHHHHHHHcccccEEEEEEEEccEEEEEEEEEEEcccccccEEEEEEEEc //