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Francisella tularensis subsp. mediasiatica FSC147 (ftul2)
Gene : rpsE
DDBJ      :rpsE         30S ribosomal protein S5
Swiss-Prot:RS5_FRATW    RecName: Full=30S ribosomal protein S5;

Homologs  Archaea  0/68 : Bacteria  906/915 : Eukaryota  24/199 : Viruses  0/175   --->[See Alignment]
d.14.1d.50.1
:166 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   10->158 1vs5E PDBj 1e-40 56.4 %
:RPS:PDB   10->159 3d5aE PDBj 1e-28 29.3 %
:RPS:SCOP  10->78 1fjgE2  d.50.1.2 * 1e-10 33.3 %
:RPS:SCOP  89->157 1fjgE1  d.14.1.1 * 9e-11 29.0 %
:HMM:SCOP  10->78 1fjgE2 d.50.1.2 * 1.7e-23 52.2 %
:HMM:SCOP  79->159 1fjgE1 d.14.1.1 * 2.3e-25 48.1 %
:RPS:PFM   11->76 PF00333 * Ribosomal_S5 3e-08 43.9 %
:RPS:PFM   90->157 PF03719 * Ribosomal_S5_C 4e-10 39.7 %
:HMM:PFM   85->158 PF03719 * Ribosomal_S5_C 1.2e-32 55.4 74/74  
:HMM:PFM   10->75 PF00333 * Ribosomal_S5 6.5e-29 56.1 66/67  
:BLT:SWISS 1->166 RS5_FRATW 2e-71 99.4 %
:PROS 28->60|PS00585|RIBOSOMAL_S5
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ACD31332.1 GT:GENE rpsE GT:PRODUCT 30S ribosomal protein S5 GT:DATABASE GIB00719CH01 GT:ORG ftul2 GB:ACCESSION GIB00719CH01 GB:LOCATION complement(1630303..1630803) GB:FROM 1630303 GB:TO 1630803 GB:DIRECTION - GB:GENE rpsE GB:PRODUCT 30S ribosomal protein S5 GB:PROTEIN_ID ACD31332.1 GB:DB_XREF GI:187713035 GB:GENE:GENE rpsE LENGTH 166 SQ:AASEQ MSNEMKKNEELIEKLVSVKRHSKTVKGGRIMSFAALTVVGDGKGRIGVGRGKSREVPAAIQKAMENAKKNMVSVNLNNDTLWYPVMSNHGASKVFMQPASAGTGIIAGGAMRSVFEAVGVHNVLAKTYGSTNPANVVRATIAGLAKIKSPDEIAEKRGLSVEEIQG GT:EXON 1|1-166:0| SW:ID RS5_FRATW SW:DE RecName: Full=30S ribosomal protein S5; SW:GN Name=rpsE; OrderedLocusNames=FTW_1741; SW:KW Complete proteome; Ribonucleoprotein; Ribosomal protein; RNA-binding;rRNA-binding. SW:EXACT F SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->166|RS5_FRATW|2e-71|99.4|166/166| GO:SWS:NREP 4 GO:SWS GO:0030529|"GO:ribonucleoprotein complex"|Ribonucleoprotein| GO:SWS GO:0005840|"GO:ribosome"|Ribosomal protein| GO:SWS GO:0003723|"GO:RNA binding"|RNA-binding| GO:SWS GO:0019843|"GO:rRNA binding"|rRNA-binding| PROS 28->60|PS00585|RIBOSOMAL_S5|PDOC00505| SEG 38->52|vvgdgkgrigvgrgk| SEG 99->110|asagtgiiagga| BL:PDB:NREP 1 BL:PDB:REP 10->158|1vs5E|1e-40|56.4|149/150| RP:PDB:NREP 1 RP:PDB:REP 10->159|3d5aE|1e-28|29.3|150/151| RP:PFM:NREP 2 RP:PFM:REP 11->76|PF00333|3e-08|43.9|66/67|Ribosomal_S5| RP:PFM:REP 90->157|PF03719|4e-10|39.7|68/74|Ribosomal_S5_C| HM:PFM:NREP 2 HM:PFM:REP 85->158|PF03719|1.2e-32|55.4|74/74|Ribosomal_S5_C| HM:PFM:REP 10->75|PF00333|6.5e-29|56.1|66/67|Ribosomal_S5| GO:PFM:NREP 9 GO:PFM GO:0003723|"GO:RNA binding"|PF00333|IPR013810| GO:PFM GO:0003735|"GO:structural constituent of ribosome"|PF00333|IPR013810| GO:PFM GO:0005622|"GO:intracellular"|PF00333|IPR013810| GO:PFM GO:0005840|"GO:ribosome"|PF00333|IPR013810| GO:PFM GO:0006412|"GO:translation"|PF00333|IPR013810| GO:PFM GO:0003735|"GO:structural constituent of ribosome"|PF03719|IPR005324| GO:PFM GO:0005622|"GO:intracellular"|PF03719|IPR005324| GO:PFM GO:0005840|"GO:ribosome"|PF03719|IPR005324| GO:PFM GO:0006412|"GO:translation"|PF03719|IPR005324| RP:SCP:NREP 2 RP:SCP:REP 10->78|1fjgE2|1e-10|33.3|69/69|d.50.1.2| RP:SCP:REP 89->157|1fjgE1|9e-11|29.0|69/81|d.14.1.1| HM:SCP:REP 10->78|1fjgE2|1.7e-23|52.2|69/69|d.50.1.2|1/1|dsRNA-binding domain-like| HM:SCP:REP 79->159|1fjgE1|2.3e-25|48.1|81/81|d.14.1.1|1/1|Ribosomal protein S5 domain 2-like| OP:NHOMO 962 OP:NHOMOORG 930 OP:PATTERN -------------------------------------------------------------------- 1111111111111111111-111111111111111111111111111111111111111111111111111111111111111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-1111111111111111111111111111111111111111111111111111111111111-111111111111111111111111111111111111111111111111111111111-1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111211111111111111111--11111111111111111111111111111111 ------------11----------------------------------------------------------------------------------------------------------------------------------------------------------11----1-112O311111142-1-1-1111- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 165 STR:RPRED 99.4 SQ:SECSTR ccEEEEEETccEEEEEEEEEEEccccccccEEEEEEEEEEcccccEEEEEEEEccHHHHHHHHHHHHHHccccccccTTcccccEEEEETTEEEEEEEccTTcEEEccHHHHHHHHTTTccEEEEEEEEcccHHHHHHHHHHHHHHcccHHHHHHHHHccccccc# PSIPRED cccccccccccEEEEEEEEEccEEEcccEEEEEEEEEEEEccccEEEEEEcccccccHHHHHHHHHHHHcEEEEEEEccccccccEEEEccEEEEEEEccccccEEEccHHHHHHHHHccccEEEEEcccccHHHHHHHHHHHHHHcccHHHHHHHccccHHHHcc //